Genomics Reporting Implementation Guide
3.0.0-ballot - Ballot International flag

This page is part of the Genetic Reporting Implementation Guide (v3.0.0-ballot: STU 3 Ballot 1) based on FHIR (HL7® FHIR® Standard) R4. The current version which supersedes this version is 2.0.0. For a full list of available versions, see the Directory of published versions

: haplotype-hla-a-1-r4 - XML Representation

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<Observation xmlns="http://hl7.org/fhir">
  <id value="haplotype-hla-a-1-r4"/>
  <meta>
    <profile
             value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype"/>
  </meta>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative: Observation</b><a name="haplotype-hla-a-1-r4"> </a></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource Observation &quot;haplotype-hla-a-1-r4&quot; </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-haplotype.html">Haplotype</a></p></div><p><b>status</b>: final</p><p><b>category</b>: Laboratory <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="http://terminology.hl7.org/5.3.0/CodeSystem-observation-category.html">Observation Category Codes</a>#laboratory)</span>, Genetics <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="http://terminology.hl7.org/5.3.0/CodeSystem-v2-0074.html">diagnosticServiceSectionId</a>#GE)</span></p><p><b>code</b>: Haplotype name <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#84414-2; <a href="https://loinc.org/">LOINC</a>#57290-9 &quot;HLA-A [Type] by High resolution&quot;)</span></p><p><b>subject</b>: <a href="Patient-ExamplePatient.html">Patient/ExamplePatient</a></p><p><b>effective</b>: 2018-07-26</p><p><b>performer</b>: <span>: aTypingLab, Inc</span></p><p><b>value</b>: HLA-A*03:01:01:01 <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (hla[3.31.0]#HLA-A*03:01:01:01)</span></p><p><b>specimen</b>: <a href="Specimen-specimen-hla-r4.html">Specimen/specimen-hla-r4</a></p><h3>Components</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Code</b></td><td><b>Value[x]</b></td></tr><tr><td style="display: none">*</td><td>Gene studied [ID] <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#48018-6)</span></td><td>HLA-A <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="http://terminology.hl7.org/5.3.0/CodeSystem-v3-hgnc.html">HUGO Gene Nomenclature Committee Genes</a>#HGNC:4931)</span></td></tr></table></div>
  </text>
  <status value="final"/>
  <category>
    <coding>
      <system
              value="http://terminology.hl7.org/CodeSystem/observation-category"/>
      <code value="laboratory"/>
    </coding>
  </category>
  <category>
    <coding>
      <system value="http://terminology.hl7.org/CodeSystem/v2-0074"/>
      <code value="GE"/>
    </coding>
  </category>
  <code>
    <coding>
      <system value="http://loinc.org"/>
      <code value="84414-2"/>
      <display value="Haplotype name"/>
    </coding>
    <coding>
      <system value="http://loinc.org"/>
      <code value="57290-9"/>
      <display value="HLA-A [Type] by High resolution"/>
    </coding>
  </code>
  <subject>🔗 
    <reference value="Patient/ExamplePatient"/>
  </subject>
  <effectiveDateTime value="2018-07-26"/>
  <performer>
    <type value="Organization"/>
    <display value="aTypingLab, Inc"/>
  </performer>
  <valueCodeableConcept>
    <coding>
      <system value="http://www.ebi.ac.uk/ipd/imgt/hla"/>
      <version value="3.31.0"/>
      <code value="HLA-A*03:01:01:01"/>
    </coding>
  </valueCodeableConcept>
  <specimen>🔗 
    <reference value="Specimen/specimen-hla-r4"/>
  </specimen>
  <component>
    <code>
      <coding>
        <system value="http://loinc.org"/>
        <code value="48018-6"/>
        <display value="Gene studied [ID]"/>
      </coding>
    </code>
    <valueCodeableConcept>
      <coding>
        <system value="http://www.genenames.org"/>
        <code value="HGNC:4931"/>
        <display value="HLA-A"/>
      </coding>
      <text value="HLA-A"/>
    </valueCodeableConcept>
  </component>
</Observation>