Genomics Reporting Implementation Guide
3.0.0-ballot - Ballot International flag

This page is part of the Genetic Reporting Implementation Guide (v3.0.0-ballot: STU 3 Ballot 1) based on FHIR (HL7® FHIR® Standard) R4. The current version which supersedes this version is 2.0.0. For a full list of available versions, see the Directory of published versions

Example Observation: HER2byImmuneStainExample

Generated Narrative: Observation

Resource Observation "HER2byImmuneStainExample"

Profile: Molecular Biomarker

status: final

category: Laboratory (Observation Category Codes#laboratory), A characterization of a given biomarker observation. (To Be Determined Codes#biomarker-category)

code: HER2 Ag [Presence] in Tissue by Immune stain (LOINC#18474-7)

subject: Patient/CGPatientExample01 " EVERYMAN"

effective: 2019-04-01

performer: Organization/ExampleOrg "some lab"

value: Present (LOINC#LA9633-4)

component

code: Gene studied [ID] (LOINC#48018-6)

value: ERBB2 (HUGO Gene Nomenclature Committee Genes#HGNC:3430)

component

code: A characterization of a given biomarker observation. (To Be Determined Codes#biomarker-category)

value: immune stain category (Molecular Biomarker Ontology Codes#immuneStain)

component

code: A characterization of a given biomarker observation. (To Be Determined Codes#biomarker-category)

value: cell receptor category (Molecular Biomarker Ontology Codes#cellReceptor)

component

code: A characterization of a given biomarker observation. (To Be Determined Codes#biomarker-category)

value: protein category (Molecular Biomarker Ontology Codes#protein)