Genomics Reporting Implementation Guide
3.0.0-ballot - Ballot International flag

This page is part of the Genetic Reporting Implementation Guide (v3.0.0-ballot: STU 3 Ballot 1) based on FHIR (HL7® FHIR® Standard) R4. The current version which supersedes this version is 2.0.0. For a full list of available versions, see the Directory of published versions

: genomicFileFatherBAM - TTL Representation

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:DocumentReference ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "genomicFileFatherBAM"] ; # 
  fhir:meta [
    ( fhir:profile [
fhir:v "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-data-file"^^xsd:anyURI ;
fhir:link <http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-data-file>     ] )
  ] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: DocumentReference</b><a name=\"genomicFileFatherBAM\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource DocumentReference &quot;genomicFileFatherBAM&quot; </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-genomic-data-file.html\">Genomic Data File</a></p></div><p><b>identifier</b>: id: 11132</p><p><b>status</b>: current</p><p><b>docStatus</b>: preliminary</p><p><b>subject</b>: <a href=\"Patient-denovoFather.html\">Patient/denovoFather</a> &quot; DENOVO&quot;</p><p><b>description</b>: A sample Document Reference instance representing a generic genomic file that may ber used as input or output of a genomic analysis pipeline.</p><p><b>securityLabel</b>: Restricted <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.3.0/CodeSystem-v3-Confidentiality.html\">Confidentiality</a>#R)</span></p><blockquote><p><b>content</b></p><h3>Attachments</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Url</b></td><td><b>Title</b></td></tr><tr><td style=\"display: none\">*</td><td><a href=\"http://www.somesystemabc.net/identifiers/files/11132\">http://www.somesystemabc.net/identifiers/files/11132</a></td><td>Fathers BAM file</td></tr></table></blockquote></div>"
  ] ; # 
  fhir:identifier ( [
fhir:system [ fhir:v "http://www.somesystemabc.net/identifiers/files"^^xsd:anyURI ] ;
fhir:value [ fhir:v "11132" ]
  ] ) ; # 
  fhir:status [ fhir:v "current"] ; # 
  fhir:docStatus [ fhir:v "preliminary"] ; # 
  fhir:subject [
fhir:reference [ fhir:v "Patient/denovoFather" ]
  ] ; # 
  fhir:description [ fhir:v "A sample Document Reference instance representing a generic genomic file that may ber used as input or output of a genomic analysis pipeline."] ; # 
  fhir:securityLabel ( [
    ( fhir:coding [
fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v3-Confidentiality"^^xsd:anyURI ] ;
fhir:code [ fhir:v "R" ] ;
fhir:display [ fhir:v "Restricted" ]     ] )
  ] ) ; # 
  fhir:content ( [
fhir:attachment [
fhir:url [ fhir:v "http://www.somesystemabc.net/identifiers/files/11132"^^xsd:anyURI ] ;
fhir:title [ fhir:v "Fathers BAM file" ]     ]
  ] ) . #