Validation Results for GenomicsReporting

Generated Tue Apr 13 19:19:25 UTC 2021, FHIR version 4.0.1 for hl7.fhir.uv.genomics-reporting#1.1.0 (canonical = http://hl7.org/fhir/uv/genomics-reporting (history)). See Errors Only

Quality Checks

Publisher Version: IG Publisher Version: v1.1.66

Publication Code: genomics-reporting . PackageId = hl7.fhir.uv.genomics-reporting, Canonical = http://hl7.org/fhir/uv/genomics-reporting

Realm Check for UV:

Version Check: 1.1.0 = ok. Step ballot in sequence STU 2, to be published at http://hl7.org/fhir/uv/genomics-reporting/2021May (subdir = 2021May)

Supressed Messages: 28 Suppressed Issues

Dependency Checks:

Package	Version	FHIR Release	Canonical	Web Base	Comment
hl7.fhir.uv.genomics-reporting	1.1.0	4.0.1	http://hl7.org/fhir/uv/genomics-reporting

Templates: hl7.fhir.template#current -> hl7.base.template#current -> fhir.base.template#current

HL7 Publication Rules: Code = genomics-reporting. All OK (path - http://hl7.org/fhir/uv/genomics-reporting/2021May)

HTA Analysis: All OK

Previous Version Comparison: Comparison with version 1.0.0

Summary: broken links = 0, errors = 0, warn = 5, info = 304

Filename	Errors	Warnings	Hints
Build Errors	0	1	0
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\CodeSystem-ConditionInheritanceMode	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\CodeSystem-SequencePhaseRelationshipCS	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\CodeSystem-TbdCodes	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ConceptMap-dna-change-type-map	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\DiagnosticReport-GenomicsReportExample01	0	0	2
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\DiagnosticReport-PGxGenomicsReportEMERGE	0	0	4
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-AnnotationExample	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-GenotypeExample1	0	0	4
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-GrouperEx01	0	0	2
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-GrouperEx02	0	0	2
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-GrouperEx03	0	0	2
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-MicrosatelliteInstabilityExample01	0	0	2
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-OverallInterpExample1	0	0	2
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-OverallInterpExample2	0	0	2
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-geno-1001	0	0	4
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-geno-1002	0	0	3
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-geno-1003	0	0	3
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1011	0	0	5
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1012	0	0	5
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1013	0	0	5
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1014	0	0	5
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1015	0	0	4
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1016	0	0	5
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1017	0	0	5
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1018	0	0	5
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1019	0	0	4
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1020	0	0	5
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1021	0	0	5
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-RegionStudiedPGx1	0	0	3
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-RegionStudiedPGx2	0	0	3
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-RegionStudiedPGx3	0	0	3
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-SequencePhaseRelationExample1	0	0	2
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TherapeuticImplicationExample1	0	0	2
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TumorMutationBurdenExample01	0	0	2
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TxImp01	0	0	3
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TxImp02	0	0	3
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TxImp03	0	0	3
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TxImp04	0	0	3
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TxImp05	0	0	3
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TxImp06	0	0	3
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-VariantExample1	0	0	4
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-VariantExample2	0	0	3
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\OperationDefinition-find-subject-variants	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Organization-ExampleOrg	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Patient-CGPatientExample01	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ServiceRequest-GenomicsServiceRequestExample01	0	0	2
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ServiceRequest-eMERGEServiceRequest	0	0	3
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Specimen-GenomicSpecimenExample01	0	0	2
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-CGRelatedArtifact	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-RecommendedAction	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-SupportingInfo	0	1	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-diagnostic-implication	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-diagnosticReport-risk	0	1	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-finding	0	1	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-genomics-base	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-genomics-report	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-genotype	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-grouper	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-haplotype	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-implication	0	1	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-msi	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-overall-interpretation	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-region-studied	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-sequence-phase-relationship	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-servicerequest	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-specimen	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-task-med-chg	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-task-rec-followup	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-therapeutic-implication	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-tmb	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-variant	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Task-PGxRecEx01	0	0	2
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Task-PGxRecEx02	0	0	2
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Task-PGxRecEx03	0	0	2
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Task-PGxRecEx04	0	0	2
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Task-PGxRecEx05	0	0	2
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Task-TaskMedChgExample1	0	0	2
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ValueSet-condition-inheritance-vs	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ValueSet-dna-change-type	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ValueSet-functional-effect	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ValueSet-hgnc	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ValueSet-hgvs	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ValueSet-high-low-codes	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ValueSet-molecular-consequence	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ValueSet-seq-phase-relationship	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ValueSet-tbd	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ValueSet-variant-inheritance	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01	0	0	94
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\SNVexample	0	0	3
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\complexVariant-nonHGVS	0	0	10
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\compound-heterozygote	0	0	8
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample	0	0	63
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-hla-glstring-r4	0	0	5
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-pgxexample	0	0	43
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\genotype-hla-a-glstring-r4	0	0	5
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\haplotype-hla-a-1-r4	0	0	4
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\obs-idh-ex	0	0	4
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-diagnostic	0	0	15
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example	0	0	79
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncologyexamples-r4	0	0	29
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19	0	0	231
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\sequence-phase-relation-CYP2C19	0	0	12
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\servicerequest-hla-a-r4	0	0	1
C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\specimen-hla-r4	0	0	1
c:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\genomics-reporting	0	0	1

n/a

warning

The jira specification file appears to be out of date with the versions, artifacts and pages currently defined in the IG. A proposed revised file to be reviewed and, if appropriate, submitted as a pull request against the XML folder in https://github.com/HL7/JIRA-Spec-Artifacts. To see the differences, perform a file compare on 'template/jira-current.xml' (a normalized view of what is in Github) and 'template/jira-new.xml' (reflects current IG content)

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\CodeSystem-ConditionInheritanceMode.json

Path

Severity

Message

CodeSystem/ConditionInheritanceMode: CodeSystem

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/CodeSystem

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\CodeSystem-SequencePhaseRelationshipCS.json

Path

Severity

Message

CodeSystem/SequencePhaseRelationshipCS: CodeSystem

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/CodeSystem

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\CodeSystem-TbdCodes.json

Path

Severity

Message

CodeSystem/TbdCodes: CodeSystem

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/CodeSystem

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ConceptMap-dna-change-type-map.json

Path

Severity

Message

ConceptMap/dna-change-type-map: ConceptMap

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/ConceptMap

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\DiagnosticReport-GenomicsReportExample01.json

Path

Severity

Message

DiagnosticReport/GenomicsReportExample01: DiagnosticReport (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/DiagnosticReport

DiagnosticReport/GenomicsReportExample01: DiagnosticReport (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-report - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\DiagnosticReport-PGxGenomicsReportEMERGE.json

Path

Severity

Message

DiagnosticReport/PGxGenomicsReportEMERGE: DiagnosticReport (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/DiagnosticReport

DiagnosticReport/PGxGenomicsReportEMERGE: DiagnosticReport.code (l62/c16)

information

None of the codings provided are in the value set http://hl7.org/fhir/ValueSet/report-codes (http://hl7.org/fhir/ValueSet/report-codes), and a coding is recommended to come from this value set) (codes = https://hgsc.bcm.edu/lab-test-codes/#emerge-seq-ngs-pnl)

DiagnosticReport/PGxGenomicsReportEMERGE: DiagnosticReport.code.coding[0] (l63/c8)

information

Code System URI 'https://hgsc.bcm.edu/lab-test-codes/' is unknown so the code cannot be validated

DiagnosticReport/PGxGenomicsReportEMERGE: DiagnosticReport (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-report - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-AnnotationExample.json

Path

Severity

Message

Observation/AnnotationExample: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/diagnostic-implication

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-GenotypeExample1.json

Path

Severity

Message

Observation/GenotypeExample1: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/GenotypeExample1: Observation.value.ofType(CodeableConcept).coding[0] (l29/c8)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/clinvar' is unknown so the code cannot be validated

Observation/GenotypeExample1: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l49/c12)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Observation/GenotypeExample1: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-GrouperEx01.json

Path

Severity

Message

Observation/GrouperEx01: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/GrouperEx01: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/grouper - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-GrouperEx02.json

Path

Severity

Message

Observation/GrouperEx02: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/GrouperEx02: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/grouper - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-GrouperEx03.json

Path

Severity

Message

Observation/GrouperEx03: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/GrouperEx03: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/grouper - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-MicrosatelliteInstabilityExample01.json

Path

Severity

Message

Observation/MicrosatelliteInstabilityExample01: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/MicrosatelliteInstabilityExample01: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/msi - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-OverallInterpExample1.json

Path

Severity

Message

Observation/OverallInterpExample1: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/OverallInterpExample1: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/overall-interpretation - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-OverallInterpExample2.json

Path

Severity

Message

Observation/OverallInterpExample2: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/OverallInterpExample2: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/overall-interpretation - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-geno-1001.json

Path

Severity

Message

Observation/Pgx-geno-1001: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/Pgx-geno-1001: Observation.value.ofType(CodeableConcept).coding[0] (l50/c8)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/clinvar' is unknown so the code cannot be validated

Observation/Pgx-geno-1001: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l39/c12)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Observation/Pgx-geno-1001: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-geno-1002.json

Path

Severity

Message

Observation/Pgx-geno-1002: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/Pgx-geno-1002: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l39/c12)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Observation/Pgx-geno-1002: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-geno-1003.json

Path

Severity

Message

Observation/Pgx-geno-1003: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/Pgx-geno-1003: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l39/c12)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Observation/Pgx-geno-1003: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1011.json

Path

Severity

Message

Observation/Pgx-var-1011: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/Pgx-var-1011: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l39/c12)

information

Code System URI 'https://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

Observation/Pgx-var-1011: Observation.component[7].value.ofType(CodeableConcept).coding[0] (l155/c12)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Observation/Pgx-var-1011: Observation.component[8].value.ofType(CodeableConcept).coding[0] (l174/c12)

information

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

Observation/Pgx-var-1011: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1012.json

Path

Severity

Message

Observation/Pgx-var-1012: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/Pgx-var-1012: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l39/c12)

information

Code System URI 'https://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

Observation/Pgx-var-1012: Observation.component[7].value.ofType(CodeableConcept).coding[0] (l155/c12)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Observation/Pgx-var-1012: Observation.component[8].value.ofType(CodeableConcept).coding[0] (l174/c12)

information

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

Observation/Pgx-var-1012: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1013.json

Path

Severity

Message

Observation/Pgx-var-1013: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/Pgx-var-1013: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l39/c12)

information

Code System URI 'https://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

Observation/Pgx-var-1013: Observation.component[7].value.ofType(CodeableConcept).coding[0] (l155/c12)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Observation/Pgx-var-1013: Observation.component[8].value.ofType(CodeableConcept).coding[0] (l174/c12)

information

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

Observation/Pgx-var-1013: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1014.json

Path

Severity

Message

Observation/Pgx-var-1014: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/Pgx-var-1014: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l39/c12)

information

Code System URI 'https://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

Observation/Pgx-var-1014: Observation.component[7].value.ofType(CodeableConcept).coding[0] (l155/c12)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Observation/Pgx-var-1014: Observation.component[8].value.ofType(CodeableConcept).coding[0] (l174/c12)

information

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

Observation/Pgx-var-1014: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1015.json

Path

Severity

Message

Observation/Pgx-var-1015: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/Pgx-var-1015: Observation.component[3].value.ofType(CodeableConcept).coding[0] (l95/c12)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Observation/Pgx-var-1015: Observation.component[4].value.ofType(CodeableConcept).coding[0] (l114/c12)

information

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

Observation/Pgx-var-1015: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1016.json

Path

Severity

Message

Observation/Pgx-var-1016: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/Pgx-var-1016: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l39/c12)

information

Code System URI 'https://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

Observation/Pgx-var-1016: Observation.component[7].value.ofType(CodeableConcept).coding[0] (l155/c12)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Observation/Pgx-var-1016: Observation.component[8].value.ofType(CodeableConcept).coding[0] (l174/c12)

information

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

Observation/Pgx-var-1016: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1017.json

Path

Severity

Message

Observation/Pgx-var-1017: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/Pgx-var-1017: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l39/c12)

information

Code System URI 'https://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

Observation/Pgx-var-1017: Observation.component[7].value.ofType(CodeableConcept).coding[0] (l155/c12)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Observation/Pgx-var-1017: Observation.component[8].value.ofType(CodeableConcept).coding[0] (l174/c12)

information

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

Observation/Pgx-var-1017: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1018.json

Path

Severity

Message

Observation/Pgx-var-1018: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/Pgx-var-1018: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l39/c12)

information

Code System URI 'https://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

Observation/Pgx-var-1018: Observation.component[7].value.ofType(CodeableConcept).coding[0] (l155/c12)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Observation/Pgx-var-1018: Observation.component[8].value.ofType(CodeableConcept).coding[0] (l174/c12)

information

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

Observation/Pgx-var-1018: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1019.json

Path

Severity

Message

Observation/Pgx-var-1019: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/Pgx-var-1019: Observation.component[3].value.ofType(CodeableConcept).coding[0] (l95/c12)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Observation/Pgx-var-1019: Observation.component[4].value.ofType(CodeableConcept).coding[0] (l114/c12)

information

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

Observation/Pgx-var-1019: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1020.json

Path

Severity

Message

Observation/Pgx-var-1020: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/Pgx-var-1020: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l39/c12)

information

Code System URI 'https://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

Observation/Pgx-var-1020: Observation.component[7].value.ofType(CodeableConcept).coding[0] (l155/c12)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Observation/Pgx-var-1020: Observation.component[8].value.ofType(CodeableConcept).coding[0] (l174/c12)

information

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

Observation/Pgx-var-1020: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1021.json

Path

Severity

Message

Observation/Pgx-var-1021: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/Pgx-var-1021: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l39/c12)

information

Code System URI 'https://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

Observation/Pgx-var-1021: Observation.component[7].value.ofType(CodeableConcept).coding[0] (l155/c12)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Observation/Pgx-var-1021: Observation.component[8].value.ofType(CodeableConcept).coding[0] (l174/c12)

information

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

Observation/Pgx-var-1021: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-RegionStudiedPGx1.json

Path

Severity

Message

Observation/RegionStudiedPGx1: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/RegionStudiedPGx1: Observation.component[1].value.ofType(CodeableConcept).coding[0] (l50/c12)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Observation/RegionStudiedPGx1: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/region-studied - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-RegionStudiedPGx2.json

Path

Severity

Message

Observation/RegionStudiedPGx2: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/RegionStudiedPGx2: Observation.component[1].value.ofType(CodeableConcept).coding[0] (l50/c12)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Observation/RegionStudiedPGx2: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/region-studied - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-RegionStudiedPGx3.json

Path

Severity

Message

Observation/RegionStudiedPGx3: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/RegionStudiedPGx3: Observation.component[1].value.ofType(CodeableConcept).coding[0] (l50/c12)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Observation/RegionStudiedPGx3: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/region-studied - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-SequencePhaseRelationExample1.json

Path

Severity

Message

Observation/SequencePhaseRelationExample1: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/SequencePhaseRelationExample1: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TherapeuticImplicationExample1.json

Path

Severity

Message

Observation/TherapeuticImplicationExample1: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/TherapeuticImplicationExample1: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TumorMutationBurdenExample01.json

Path

Severity

Message

Observation/TumorMutationBurdenExample01: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/TumorMutationBurdenExample01: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/tmb - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TxImp01.json

Path

Severity

Message

Observation/TxImp01: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/TxImp01: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l31/c12)

information

Code System URI 'http://ncimeta.nci.nih.gov' is unknown so the code cannot be validated

Observation/TxImp01: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TxImp02.json

Path

Severity

Message

Observation/TxImp02: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/TxImp02: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l31/c12)

information

Code System URI 'http://ncimeta.nci.nih.gov' is unknown so the code cannot be validated

Observation/TxImp02: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TxImp03.json

Path

Severity

Message

Observation/TxImp03: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/TxImp03: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l31/c12)

information

Code System URI 'http://ncimeta.nci.nih.gov' is unknown so the code cannot be validated

Observation/TxImp03: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TxImp04.json

Path

Severity

Message

Observation/TxImp04: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/TxImp04: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l31/c12)

information

Code System URI 'http://ncimeta.nci.nih.gov' is unknown so the code cannot be validated

Observation/TxImp04: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TxImp05.json

Path

Severity

Message

Observation/TxImp05: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/TxImp05: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l31/c12)

information

Code System URI 'http://ncimeta.nci.nih.gov' is unknown so the code cannot be validated

Observation/TxImp05: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TxImp06.json

Path

Severity

Message

Observation/TxImp06: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/TxImp06: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l31/c12)

information

Code System URI 'http://ncimeta.nci.nih.gov' is unknown so the code cannot be validated

Observation/TxImp06: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-VariantExample1.json

Path

Severity

Message

Observation/VariantExample1: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/VariantExample1: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l39/c12)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Observation/VariantExample1: Observation.component[1].value.ofType(CodeableConcept).coding[0] (l58/c12)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/clinvar' is unknown so the code cannot be validated

Observation/VariantExample1: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-VariantExample2.json

Path

Severity

Message

Observation/VariantExample2: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Observation/VariantExample2: Observation.component[1].value.ofType(CodeableConcept).coding[0] (l83/c12)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

Observation/VariantExample2: Observation (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\OperationDefinition-find-subject-variants.json

Path

Severity

Message

OperationDefinition/find-subject-variants: OperationDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/OperationDefinition

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Organization-ExampleOrg.json

Path

Severity

Message

Organization/ExampleOrg: Organization (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Organization

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Patient-CGPatientExample01.json

Path

Severity

Message

Patient/CGPatientExample01: Patient (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Patient

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ServiceRequest-GenomicsServiceRequestExample01.json

Path

Severity

Message

ServiceRequest/GenomicsServiceRequestExample01: ServiceRequest (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/ServiceRequest

ServiceRequest/GenomicsServiceRequestExample01: ServiceRequest (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/servicerequest - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ServiceRequest-eMERGEServiceRequest.json

Path

Severity

Message

ServiceRequest/eMERGEServiceRequest: ServiceRequest (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/ServiceRequest

ServiceRequest/eMERGEServiceRequest: ServiceRequest.code.coding[0] (l12/c8)

information

Code System URI 'https://hgsc.bcm.edu/lab-test-codes/' is unknown so the code cannot be validated

ServiceRequest/eMERGEServiceRequest: ServiceRequest (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/servicerequest - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Specimen-GenomicSpecimenExample01.json

Path

Severity

Message

Specimen/GenomicSpecimenExample01: Specimen (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Specimen

Specimen/GenomicSpecimenExample01: Specimen (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/specimen - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-CGRelatedArtifact.json

Path

Severity

Message

StructureDefinition/CGRelatedArtifact: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-RecommendedAction.json

Path

Severity

Message

StructureDefinition/RecommendedAction: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-SupportingInfo.json

Path

Severity

Message

StructureDefinition/SupportingInfo: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

StructureDefinition.where(url = 'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/SupportingInfo')

warning

The Implementation Guide contains no examples for this extension

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-diagnostic-implication.json

Path

Severity

Message

StructureDefinition/diagnostic-implication: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-diagnosticReport-risk.json

Path

Severity

Message

StructureDefinition/diagnosticReport-risk: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

StructureDefinition.where(url = 'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/diagnosticReport-risk')

warning

The Implementation Guide contains no examples for this extension

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-finding.json

Path

Severity

Message

StructureDefinition/finding: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

StructureDefinition.where(url = 'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/finding')

warning

The Implementation Guide contains no examples for this profile

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-genomics-base.json

Path

Severity

Message

StructureDefinition/genomics-base: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-genomics-report.json

Path

Severity

Message

StructureDefinition/genomics-report: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-genotype.json

Path

Severity

Message

StructureDefinition/genotype: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-grouper.json

Path

Severity

Message

StructureDefinition/grouper: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-haplotype.json

Path

Severity

Message

StructureDefinition/haplotype: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-implication.json

Path

Severity

Message

StructureDefinition/implication: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

StructureDefinition.where(url = 'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/implication')

warning

The Implementation Guide contains no examples for this profile

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-msi.json

Path

Severity

Message

StructureDefinition/msi: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-overall-interpretation.json

Path

Severity

Message

StructureDefinition/overall-interpretation: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-region-studied.json

Path

Severity

Message

StructureDefinition/region-studied: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-sequence-phase-relationship.json

Path

Severity

Message

StructureDefinition/sequence-phase-relationship: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-servicerequest.json

Path

Severity

Message

StructureDefinition/servicerequest: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-specimen.json

Path

Severity

Message

StructureDefinition/specimen: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-task-med-chg.json

Path

Severity

Message

StructureDefinition/task-med-chg: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-task-rec-followup.json

Path

Severity

Message

StructureDefinition/task-rec-followup: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-therapeutic-implication.json

Path

Severity

Message

StructureDefinition/therapeutic-implication: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-tmb.json

Path

Severity

Message

StructureDefinition/tmb: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\StructureDefinition-variant.json

Path

Severity

Message

StructureDefinition/variant: StructureDefinition

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Task-PGxRecEx01.json

Path

Severity

Message

Task/PGxRecEx01: Task (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Task

Task/PGxRecEx01: Task (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/task-rec-followup - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Task-PGxRecEx02.json

Path

Severity

Message

Task/PGxRecEx02: Task (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Task

Task/PGxRecEx02: Task (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/task-rec-followup - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Task-PGxRecEx03.json

Path

Severity

Message

Task/PGxRecEx03: Task (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Task

Task/PGxRecEx03: Task (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/task-rec-followup - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Task-PGxRecEx04.json

Path

Severity

Message

Task/PGxRecEx04: Task (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Task

Task/PGxRecEx04: Task (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/task-rec-followup - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Task-PGxRecEx05.json

Path

Severity

Message

Task/PGxRecEx05: Task (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Task

Task/PGxRecEx05: Task (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/task-rec-followup - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Task-TaskMedChgExample1.json

Path

Severity

Message

Task/TaskMedChgExample1: Task (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Task

Task/TaskMedChgExample1: Task (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/task-med-chg - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ValueSet-condition-inheritance-vs.json

Path

Severity

Message

ValueSet/condition-inheritance-vs: ValueSet

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/ValueSet

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ValueSet-dna-change-type.json

Path

Severity

Message

ValueSet/dna-change-type: ValueSet

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/ValueSet

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ValueSet-functional-effect.json

Path

Severity

Message

ValueSet/functional-effect: ValueSet

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/ValueSet

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ValueSet-hgnc.json

Path

Severity

Message

ValueSet/hgnc: ValueSet

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/ValueSet

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ValueSet-hgvs.json

Path

Severity

Message

ValueSet/hgvs: ValueSet

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/ValueSet

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ValueSet-high-low-codes.json

Path

Severity

Message

ValueSet/high-low-codes: ValueSet

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/ValueSet

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ValueSet-molecular-consequence.json

Path

Severity

Message

ValueSet/molecular-consequence: ValueSet

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/ValueSet

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ValueSet-seq-phase-relationship.json

Path

Severity

Message

ValueSet/seq-phase-relationship: ValueSet

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/ValueSet

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ValueSet-tbd.json

Path

Severity

Message

ValueSet/tbd: ValueSet

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/ValueSet

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ValueSet-variant-inheritance.json

Path

Severity

Message

ValueSet/variant-inheritance: ValueSet

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/ValueSet

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Path

Severity

Message

Bundle/CG-IG-HLA-FullBundle-01: Bundle (l23/c176)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Bundle

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[0].resource.ofType(Patient) (l30/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Patient

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[1].resource.ofType(Specimen) (l87/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Specimen

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[1].resource.ofType(Specimen) (l87/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/specimen - listed in meta

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[2].resource.ofType(Organization) (l129/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Organization

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[3].resource.ofType(Organization) (l166/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Organization

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[4].resource.ofType(ServiceRequest) (l203/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/ServiceRequest

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[4].resource.ofType(ServiceRequest) (l203/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/servicerequest - listed in meta

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[5].resource.ofType(MolecularSequence) (l254/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/MolecularSequence

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[5].resource.ofType(MolecularSequence).referenceSeq.referenceSeqId.coding[0] (l266/c21)

information

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[6].resource.ofType(MolecularSequence) (l288/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/MolecularSequence

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[6].resource.ofType(MolecularSequence).referenceSeq.referenceSeqId.coding[0] (l300/c21)

information

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[7].resource.ofType(MolecularSequence) (l322/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/MolecularSequence

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[7].resource.ofType(MolecularSequence).referenceSeq.referenceSeqId.coding[0] (l334/c21)

information

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[8].resource.ofType(MolecularSequence) (l356/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/MolecularSequence

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[8].resource.ofType(MolecularSequence).referenceSeq.referenceSeqId.coding[0] (l368/c21)

information

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[9].resource.ofType(Observation) (l390/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[9].resource.ofType(Observation).value.ofType(CodeableConcept).coding[0] (l422/c19)

information

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[9].resource.ofType(Observation).method.coding[0] (l430/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/gtr' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[9].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l459/c21)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[9].resource.ofType(Observation) (l390/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype - listed in meta

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[9].resource.ofType(Observation).derivedFrom[0] (l440/c22)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype Show Reasoning

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[9].resource.ofType(Observation).derivedFrom[1] (l445/c22)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype Show Reasoning

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[10].resource.ofType(Observation) (l491/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[10].resource.ofType(Observation).value.ofType(CodeableConcept).coding[0] (l523/c19)

information

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[10].resource.ofType(Observation).method.coding[0] (l531/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/gtr' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[10].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l560/c21)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[10].resource.ofType(Observation) (l491/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype - listed in meta

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[10].resource.ofType(Observation).derivedFrom[0] (l541/c22)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype Show Reasoning

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[10].resource.ofType(Observation).derivedFrom[1] (l546/c22)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype Show Reasoning

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[11].resource.ofType(Observation) (l592/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[11].resource.ofType(Observation).value.ofType(CodeableConcept).coding[0] (l629/c19)

information

Code System URI 'http://glstring.org' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[11].resource.ofType(Observation).method.coding[0] (l636/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/gtr' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[11].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l667/c21)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[11].resource.ofType(Observation) (l592/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype - listed in meta

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[12].resource.ofType(MolecularSequence) (l686/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/MolecularSequence

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[12].resource.ofType(MolecularSequence).referenceSeq.referenceSeqId.coding[0] (l698/c21)

information

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[13].resource.ofType(MolecularSequence) (l720/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/MolecularSequence

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[13].resource.ofType(MolecularSequence).referenceSeq.referenceSeqId.coding[0] (l732/c21)

information

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[14].resource.ofType(MolecularSequence) (l754/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/MolecularSequence

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[14].resource.ofType(MolecularSequence).referenceSeq.referenceSeqId.coding[0] (l766/c21)

information

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[15].resource.ofType(MolecularSequence) (l788/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/MolecularSequence

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[15].resource.ofType(MolecularSequence).referenceSeq.referenceSeqId.coding[0] (l800/c21)

information

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[16].resource.ofType(Observation) (l822/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[16].resource.ofType(Observation).value.ofType(CodeableConcept).coding[0] (l854/c19)

information

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[16].resource.ofType(Observation).method.coding[0] (l862/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/gtr' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[16].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l891/c21)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[16].resource.ofType(Observation) (l822/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype - listed in meta

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[16].resource.ofType(Observation).derivedFrom[0] (l872/c22)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype Show Reasoning

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[16].resource.ofType(Observation).derivedFrom[1] (l877/c22)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype Show Reasoning

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[17].resource.ofType(Observation) (l923/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[17].resource.ofType(Observation).value.ofType(CodeableConcept).coding[0] (l955/c19)

information

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[17].resource.ofType(Observation).method.coding[0] (l963/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/gtr' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[17].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l992/c21)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[17].resource.ofType(Observation) (l923/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype - listed in meta

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[17].resource.ofType(Observation).derivedFrom[0] (l973/c22)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype Show Reasoning

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[17].resource.ofType(Observation).derivedFrom[1] (l978/c22)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype Show Reasoning

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[18].resource.ofType(Observation) (l1010/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[18].resource.ofType(Observation).value.ofType(CodeableConcept).coding[0] (l1047/c19)

information

Code System URI 'http://glstring.org' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[18].resource.ofType(Observation).method.coding[0] (l1054/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/gtr' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[18].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l1084/c21)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[18].resource.ofType(Observation) (l1010/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype - listed in meta

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[19].resource.ofType(MolecularSequence) (l1103/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/MolecularSequence

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[19].resource.ofType(MolecularSequence).referenceSeq.referenceSeqId.coding[0] (l1115/c21)

information

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[20].resource.ofType(MolecularSequence) (l1137/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/MolecularSequence

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[20].resource.ofType(MolecularSequence).referenceSeq.referenceSeqId.coding[0] (l1149/c21)

information

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[21].resource.ofType(MolecularSequence) (l1171/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/MolecularSequence

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[21].resource.ofType(MolecularSequence).referenceSeq.referenceSeqId.coding[0] (l1183/c21)

information

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[22].resource.ofType(MolecularSequence) (l1205/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/MolecularSequence

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[22].resource.ofType(MolecularSequence).referenceSeq.referenceSeqId.coding[0] (l1217/c21)

information

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[23].resource.ofType(Observation) (l1239/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[23].resource.ofType(Observation).value.ofType(CodeableConcept).coding[0] (l1271/c19)

information

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[23].resource.ofType(Observation).method.coding[0] (l1279/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/gtr' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[23].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l1308/c21)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[23].resource.ofType(Observation) (l1239/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype - listed in meta

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[23].resource.ofType(Observation).derivedFrom[0] (l1289/c22)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype Show Reasoning

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[23].resource.ofType(Observation).derivedFrom[1] (l1294/c22)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype Show Reasoning

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[24].resource.ofType(Observation) (l1326/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[24].resource.ofType(Observation).value.ofType(CodeableConcept).coding[0] (l1358/c19)

information

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[24].resource.ofType(Observation).method.coding[0] (l1366/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/gtr' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[24].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l1395/c21)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[24].resource.ofType(Observation) (l1326/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype - listed in meta

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[24].resource.ofType(Observation).derivedFrom[0] (l1376/c22)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype Show Reasoning

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[24].resource.ofType(Observation).derivedFrom[1] (l1381/c22)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype Show Reasoning

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[25].resource.ofType(Observation) (l1413/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[25].resource.ofType(Observation).value.ofType(CodeableConcept).coding[0] (l1450/c19)

information

Code System URI 'http://glstring.org' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[25].resource.ofType(Observation).method.coding[0] (l1457/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/gtr' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[25].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l1487/c21)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[25].resource.ofType(Observation) (l1413/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype - listed in meta

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[26].resource.ofType(DiagnosticReport) (l1519/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/DiagnosticReport

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[26].resource.ofType(DiagnosticReport).code.coding[1] (l1579/c19)

information

Code System URI 'http://genenames.org/geneId' is unknown so the code cannot be validated

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[26].resource.ofType(DiagnosticReport) (l1519/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-report - listed in meta

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[26].resource.ofType(DiagnosticReport).extension[0] (l1544/c96)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-report Show Reasoning

Bundle/CG-IG-HLA-FullBundle-01: Bundle.entry[26].resource.ofType(DiagnosticReport).extension[1] (l1552/c126)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-report Show Reasoning

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\SNVexample.xml

Path

Severity

Message

Observation/SNVexample: Observation (l1/c42)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant

Observation/SNVexample: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l74/c15)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Observation/SNVexample: Observation.component[6].value.ofType(CodeableConcept).coding[0] (l173/c15)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\complexVariant-nonHGVS.xml

Path

Severity

Message

Bundle/complexVariant-nonHGVS: Bundle (l1/c37)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Bundle

Bundle/complexVariant-nonHGVS: Bundle.entry[0].resource.ofType(Observation) (l6/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/complexVariant-nonHGVS: Bundle.entry[0].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l65/c21)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

Bundle/complexVariant-nonHGVS: Bundle.entry[0].resource.ofType(Observation) (l6/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/complexVariant-nonHGVS: Bundle.entry[1].resource.ofType(Observation) (l119/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/complexVariant-nonHGVS: Bundle.entry[1].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l176/c21)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

Bundle/complexVariant-nonHGVS: Bundle.entry[1].resource.ofType(Observation) (l119/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/complexVariant-nonHGVS: Bundle.entry[2].resource.ofType(Observation) (l229/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/complexVariant-nonHGVS: Bundle.entry[2].resource.ofType(Observation) (l229/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/complexVariant-nonHGVS: Bundle.entry[2].resource.ofType(Observation).component[0] (l267/c20)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant Show Reasoning

This element does not match any known slicedefined_in_the_profilehttp://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant

Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'conclusion-string')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48018-6')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48001-2')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '62374-4')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48004-6')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48019-4')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'molecular-consequence')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81252-9')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81290-9')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48002-0')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48005-3')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48006-1')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '51958-7')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48013-7')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81258-6')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '82121-5')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '53034-5')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '82155-3')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '69547-8')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '69551-0')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '92822-6')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'exact-start-end')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'outer-start-end')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'inner-start-end')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81291-7')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'variant-inheritance')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48000-4')).exists()

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\compound-heterozygote.xml

Path

Severity

Message

Bundle/compound-heterozygote: Bundle (l9/c176)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Bundle

Bundle/compound-heterozygote: Bundle.entry[0].resource.ofType(Observation) (l15/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/compound-heterozygote: Bundle.entry[0].resource.ofType(Observation) (l15/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/compound-heterozygote: Bundle.entry[1].resource.ofType(Observation) (l67/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/compound-heterozygote: Bundle.entry[1].resource.ofType(Observation) (l67/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/compound-heterozygote: Bundle.entry[2].resource.ofType(Observation) (l118/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/compound-heterozygote: Bundle.entry[2].resource.ofType(Observation) (l118/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/compound-heterozygote: Bundle.entry[2].resource.ofType(Observation).component[0] (l154/c24)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant Show Reasoning

This element does not match any known slicedefined_in_the_profilehttp://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant

Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'conclusion-string')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48018-6')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48001-2')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '62374-4')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48004-6')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48019-4')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'molecular-consequence')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81252-9')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81290-9')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48002-0')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48005-3')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48006-1')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '51958-7')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48013-7')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81258-6')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '82121-5')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '53034-5')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '82155-3')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '69547-8')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '69551-0')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '92822-6')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'exact-start-end')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'outer-start-end')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'inner-start-end')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81291-7')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'variant-inheritance')).exists()
Bundle.entry[2].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48000-4')).exists()

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample.xml

Path

Severity

Message

Bundle/diagnosticreport-cgexample: Bundle (l13/c176)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Bundle

Bundle/diagnosticreport-cgexample: Bundle.entry[0].resource.ofType(DiagnosticReport) (l18/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/DiagnosticReport

Bundle/diagnosticreport-cgexample: Bundle.entry[0].resource.ofType(DiagnosticReport) (l18/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-report - listed in meta

Bundle/diagnosticreport-cgexample: Bundle.entry[1].resource.ofType(Patient) (l140/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Patient

Bundle/diagnosticreport-cgexample: Bundle.entry[2].resource.ofType(Specimen) (l152/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Specimen

Bundle/diagnosticreport-cgexample: Bundle.entry[2].resource.ofType(Specimen) (l152/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/specimen - listed in meta

Bundle/diagnosticreport-cgexample: Bundle.entry[3].resource.ofType(Organization) (l171/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Organization

Bundle/diagnosticreport-cgexample: Bundle.entry[4].resource.ofType(ServiceRequest) (l184/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/ServiceRequest

Bundle/diagnosticreport-cgexample: Bundle.entry[4].resource.ofType(ServiceRequest) (l184/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/servicerequest - listed in meta

Bundle/diagnosticreport-cgexample: Bundle.entry[5].resource.ofType(Observation) (l215/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/diagnosticreport-cgexample: Bundle.entry[5].resource.ofType(Observation) (l215/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/overall-interpretation - listed in meta

Bundle/diagnosticreport-cgexample: Bundle.entry[6].resource.ofType(Observation) (l488/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/diagnosticreport-cgexample: Bundle.entry[6].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l542/c21)

information

Code System URI 'http://example.org/clinvar' is unknown so the code cannot be validated

Bundle/diagnosticreport-cgexample: Bundle.entry[6].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[1] (l550/c21)

information

Code System URI 'http://example.org/cigar' is unknown so the code cannot be validated

Bundle/diagnosticreport-cgexample: Bundle.entry[6].resource.ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l565/c21)

information

Code System URI 'http://example.org/hgnc' is unknown so the code cannot be validated

Bundle/diagnosticreport-cgexample: Bundle.entry[6].resource.ofType(Observation).component[2].value.ofType(CodeableConcept).coding[0] (l582/c21)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

Bundle/diagnosticreport-cgexample: Bundle.entry[6].resource.ofType(Observation).component[3].value.ofType(CodeableConcept).coding[0] (l597/c21)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

Bundle/diagnosticreport-cgexample: Bundle.entry[6].resource.ofType(Observation).component[5].value.ofType(CodeableConcept).coding[0] (l628/c21)

information

Code System URI 'http://example.org/dbsnp' is unknown so the code cannot be validated

Bundle/diagnosticreport-cgexample: Bundle.entry[6].resource.ofType(Observation).component[13].value.ofType(CodeableConcept).coding[0] (l754/c21)

information

Code System URI 'http://example.org/Chrom-Loc' is unknown so the code cannot be validated

Bundle/diagnosticreport-cgexample: Bundle.entry[6].resource.ofType(Observation) (l488/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/diagnosticreport-cgexample: Bundle.entry[6].resource.ofType(Observation).component[5] (l620/c20)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant Show Reasoning

This element does not match any known slicedefined_in_the_profilehttp://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant

Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'conclusion-string')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48018-6')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48001-2')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '62374-4')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48004-6')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48019-4')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'molecular-consequence')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81252-9')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81290-9')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48002-0')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48005-3')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48006-1')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '51958-7')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48013-7')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81258-6')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '82121-5')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '53034-5')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '82155-3')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '69547-8')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '69551-0')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '92822-6')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'exact-start-end')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'outer-start-end')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'inner-start-end')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81291-7')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'variant-inheritance')).exists()
Bundle.entry[6].resource.ofType(Observation).component[5]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48000-4')).exists()

Bundle/diagnosticreport-cgexample: Bundle.entry[6].resource.ofType(Observation).component[19] (l856/c20)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant Show Reasoning

This element does not match any known slicedefined_in_the_profilehttp://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant

Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'conclusion-string')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48018-6')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48001-2')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '62374-4')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48004-6')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48019-4')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'molecular-consequence')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81252-9')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81290-9')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48002-0')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48005-3')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48006-1')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '51958-7')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48013-7')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81258-6')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '82121-5')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '53034-5')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '82155-3')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '69547-8')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '69551-0')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '92822-6')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'exact-start-end')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'outer-start-end')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'inner-start-end')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81291-7')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'variant-inheritance')).exists()
Bundle.entry[6].resource.ofType(Observation).component[19]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48000-4')).exists()

Bundle/diagnosticreport-cgexample: Bundle.entry[6].resource.ofType(Observation).component[20] (l868/c20)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant Show Reasoning

This element does not match any known slicedefined_in_the_profilehttp://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant

Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'conclusion-string')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48018-6')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48001-2')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '62374-4')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48004-6')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48019-4')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'molecular-consequence')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81252-9')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81290-9')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48002-0')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48005-3')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48006-1')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '51958-7')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48013-7')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81258-6')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '82121-5')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '53034-5')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '82155-3')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '69547-8')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '69551-0')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '92822-6')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'exact-start-end')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'outer-start-end')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'inner-start-end')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81291-7')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'variant-inheritance')).exists()
Bundle.entry[6].resource.ofType(Observation).component[20]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48000-4')).exists()

Bundle/diagnosticreport-cgexample: Bundle.entry[6].resource.ofType(Observation).component[21] (l883/c20)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant Show Reasoning

This element does not match any known slicedefined_in_the_profilehttp://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant

Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'conclusion-string')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48018-6')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48001-2')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '62374-4')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48004-6')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48019-4')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'molecular-consequence')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81252-9')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81290-9')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48002-0')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48005-3')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48006-1')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '51958-7')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48013-7')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81258-6')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '82121-5')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '53034-5')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '82155-3')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '69547-8')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '69551-0')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '92822-6')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'exact-start-end')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'outer-start-end')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'inner-start-end')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81291-7')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'variant-inheritance')).exists()
Bundle.entry[6].resource.ofType(Observation).component[21]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48000-4')).exists()

Bundle/diagnosticreport-cgexample: Bundle.entry[6].resource.ofType(Observation).component[22] (l900/c20)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant Show Reasoning

This element does not match any known slicedefined_in_the_profilehttp://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant

Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'conclusion-string')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48018-6')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48001-2')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '62374-4')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48004-6')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48019-4')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'molecular-consequence')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81252-9')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81290-9')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48002-0')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48005-3')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48006-1')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '51958-7')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48013-7')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81258-6')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '82121-5')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '53034-5')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '82155-3')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '69547-8')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '69551-0')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '92822-6')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'exact-start-end')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'outer-start-end')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'inner-start-end')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81291-7')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'variant-inheritance')).exists()
Bundle.entry[6].resource.ofType(Observation).component[22]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48000-4')).exists()

Bundle/diagnosticreport-cgexample: Bundle.entry[7].resource.ofType(Observation) (l923/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/diagnosticreport-cgexample: Bundle.entry[7].resource.ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l981/c21)

information

Code System URI 'http://example.org/MedGen-Dis' is unknown so the code cannot be validated

Bundle/diagnosticreport-cgexample: Bundle.entry[7].resource.ofType(Observation) (l923/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/diagnostic-implication - listed in meta

Bundle/diagnosticreport-cgexample: Bundle.entry[8].resource.ofType(Observation) (l994/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/diagnosticreport-cgexample: Bundle.entry[8].resource.ofType(Observation) (l994/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/diagnosticreport-cgexample: Bundle.entry[8].resource.ofType(Observation).component[0] (l1063/c20)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant Show Reasoning

This element does not match any known slicedefined_in_the_profilehttp://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant

Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'conclusion-string')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48018-6')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48001-2')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '62374-4')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48004-6')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48019-4')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'molecular-consequence')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81252-9')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81290-9')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48002-0')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48005-3')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48006-1')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '51958-7')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48013-7')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81258-6')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '82121-5')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '53034-5')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '82155-3')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '69547-8')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '69551-0')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '92822-6')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'exact-start-end')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'outer-start-end')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'inner-start-end')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81291-7')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'variant-inheritance')).exists()
Bundle.entry[8].resource.ofType(Observation).component[0]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48000-4')).exists()

Bundle/diagnosticreport-cgexample: Bundle.entry[9].resource.ofType(Observation) (l1083/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/diagnosticreport-cgexample: Bundle.entry[9].resource.ofType(Observation) (l1083/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/diagnostic-implication - listed in meta

Bundle/diagnosticreport-cgexample: Bundle.entry[10].resource.ofType(Observation) (l1154/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/diagnosticreport-cgexample: Bundle.entry[10].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l1207/c21)

information

Code System URI 'http://example.org/clinvar' is unknown so the code cannot be validated

Bundle/diagnosticreport-cgexample: Bundle.entry[10].resource.ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l1225/c21)

information

Code System URI 'http://example.org/RefSeq-T' is unknown so the code cannot be validated

Bundle/diagnosticreport-cgexample: Bundle.entry[10].resource.ofType(Observation) (l1154/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/diagnosticreport-cgexample: Bundle.entry[11].resource.ofType(Observation) (l1310/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/diagnosticreport-cgexample: Bundle.entry[11].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l1363/c21)

information

Code System URI 'http://example.org/clinvar' is unknown so the code cannot be validated

Bundle/diagnosticreport-cgexample: Bundle.entry[11].resource.ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l1381/c21)

information

Code System URI 'http://example.org/RefSeq-T' is unknown so the code cannot be validated

Bundle/diagnosticreport-cgexample: Bundle.entry[11].resource.ofType(Observation) (l1310/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/diagnosticreport-cgexample: Bundle.entry[12].resource.ofType(Observation) (l1414/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/diagnosticreport-cgexample: Bundle.entry[12].resource.ofType(Observation) (l1414/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/grouper - listed in meta

Bundle/diagnosticreport-cgexample: Bundle.entry[13].resource.ofType(Observation) (l1468/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/diagnosticreport-cgexample: Bundle.entry[13].resource.ofType(Observation).value.ofType(CodeableConcept).coding[0] (l1500/c19)

information

Code System URI 'http://example.org/???' is unknown so the code cannot be validated

Bundle/diagnosticreport-cgexample: Bundle.entry[13].resource.ofType(Observation) (l1468/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype - listed in meta

Bundle/diagnosticreport-cgexample: Bundle.entry[14].resource.ofType(Observation) (l1518/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/diagnosticreport-cgexample: Bundle.entry[14].resource.ofType(Observation).value.ofType(CodeableConcept).coding[0] (l1554/c19)

information

Code System URI 'http://www.pharmvar.org' is unknown so the code cannot be validated

Bundle/diagnosticreport-cgexample: Bundle.entry[14].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l1580/c21)

information

Code System URI 'http://example.org/hgnc' is unknown so the code cannot be validated

Bundle/diagnosticreport-cgexample: Bundle.entry[14].resource.ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l1595/c21)

information

Code System URI 'http://example.org/hgnc' is unknown so the code cannot be validated

Bundle/diagnosticreport-cgexample: Bundle.entry[14].resource.ofType(Observation) (l1518/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype - listed in meta

Bundle/diagnosticreport-cgexample: resource.value.ofType(CodeableConcept).coding[0] (l1554/c19)

information

Code System URI 'http://www.pharmvar.org' is unknown so the code cannot be validated

Bundle/diagnosticreport-cgexample: resource.component[0].value.ofType(CodeableConcept).coding[0] (l1580/c21)

information

Code System URI 'http://example.org/hgnc' is unknown so the code cannot be validated

Bundle/diagnosticreport-cgexample: resource.component[1].value.ofType(CodeableConcept).coding[0] (l1595/c21)

information

Code System URI 'http://example.org/hgnc' is unknown so the code cannot be validated

Bundle/diagnosticreport-cgexample: Bundle.entry[15].resource.ofType(Observation) (l1608/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/diagnosticreport-cgexample: Bundle.entry[15].resource.ofType(Observation) (l1608/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication - listed in meta

Bundle/diagnosticreport-cgexample: Bundle.entry[16].resource.ofType(Observation) (l1680/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/diagnosticreport-cgexample: Bundle.entry[16].resource.ofType(Observation) (l1680/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication - listed in meta

Bundle/diagnosticreport-cgexample: Bundle.entry[17].resource.ofType(Observation) (l1751/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/diagnosticreport-cgexample: Bundle.entry[17].resource.ofType(Observation) (l1751/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication - listed in meta

Bundle/diagnosticreport-cgexample: Bundle.entry[18].resource.ofType(Task) (l1822/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Task

Bundle/diagnosticreport-cgexample: Bundle.entry[18].resource.ofType(Task).contained.ofType(MedicationStatement) (l1833/c20)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/MedicationStatement

Bundle/diagnosticreport-cgexample: Bundle.entry[18].resource.ofType(Task) (l1822/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/task-med-chg - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-hla-glstring-r4.xml

Path

Severity

Message

DiagnosticReport/diagnosticreport-hla-glstring-r4: DiagnosticReport (l1/c47)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-report

DiagnosticReport/diagnosticreport-hla-glstring-r4: DiagnosticReport.result[0] (l70/c13)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-report Show Reasoning

DiagnosticReport/diagnosticreport-hla-glstring-r4: DiagnosticReport.result[1] (l75/c13)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-report Show Reasoning

DiagnosticReport/diagnosticreport-hla-glstring-r4: DiagnosticReport.result[2] (l80/c13)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-report Show Reasoning

DiagnosticReport/diagnosticreport-hla-glstring-r4: DiagnosticReport.code.coding[1] (l55/c17)

information

Code System URI 'http://genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-pgxexample.xml

Path

Severity

Message

Bundle/diagnosticreport-pgxexample: Bundle (l2/c176)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Bundle

Bundle/diagnosticreport-pgxexample: Bundle.entry[0].resource.ofType(DiagnosticReport) (l8/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/DiagnosticReport

Bundle/diagnosticreport-pgxexample: Bundle.entry[0].resource.ofType(DiagnosticReport) (l8/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-report - listed in meta

Bundle/diagnosticreport-pgxexample: Bundle.entry[1].resource.ofType(Patient) (l73/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Patient

Bundle/diagnosticreport-pgxexample: Bundle.entry[2].resource.ofType(Specimen) (l89/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Specimen

Bundle/diagnosticreport-pgxexample: Bundle.entry[2].resource.ofType(Specimen) (l89/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/specimen - listed in meta

Bundle/diagnosticreport-pgxexample: Bundle.entry[3].resource.ofType(Organization) (l112/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Organization

Bundle/diagnosticreport-pgxexample: Bundle.entry[4].resource.ofType(ServiceRequest) (l130/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/ServiceRequest

Bundle/diagnosticreport-pgxexample: Bundle.entry[4].resource.ofType(ServiceRequest) (l130/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/servicerequest - listed in meta

Bundle/diagnosticreport-pgxexample: Bundle.entry[5].resource.ofType(Observation) (l164/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/diagnosticreport-pgxexample: Bundle.entry[5].resource.ofType(Observation) (l164/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication - listed in meta

Bundle/diagnosticreport-pgxexample: Bundle.entry[6].resource.ofType(Observation) (l240/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/diagnosticreport-pgxexample: Bundle.entry[6].resource.ofType(Observation).value.ofType(CodeableConcept).coding[0] (l263/c19)

information

Code System URI 'http://www.pharmvar.org' is unknown so the code cannot be validated

Bundle/diagnosticreport-pgxexample: Bundle.entry[6].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l287/c21)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/diagnosticreport-pgxexample: Bundle.entry[6].resource.ofType(Observation) (l240/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype - listed in meta

Bundle/diagnosticreport-pgxexample: resource.value.ofType(CodeableConcept).coding[0] (l263/c19)

information

Code System URI 'http://www.pharmvar.org' is unknown so the code cannot be validated

Bundle/diagnosticreport-pgxexample: resource.component[0].value.ofType(CodeableConcept).coding[0] (l287/c21)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/diagnosticreport-pgxexample: Bundle.entry[7].resource.ofType(Observation) (l304/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/diagnosticreport-pgxexample: Bundle.entry[7].resource.ofType(Observation).value.ofType(CodeableConcept).coding[0] (l327/c19)

information

Code System URI 'http://www.pharmvar.org' is unknown so the code cannot be validated

Bundle/diagnosticreport-pgxexample: Bundle.entry[7].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l348/c21)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/diagnosticreport-pgxexample: Bundle.entry[7].resource.ofType(Observation) (l304/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype - listed in meta

Bundle/diagnosticreport-pgxexample: Bundle.entry[8].resource.ofType(Observation) (l364/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/diagnosticreport-pgxexample: Bundle.entry[8].resource.ofType(Observation).value.ofType(CodeableConcept).coding[0] (l387/c19)

information

Code System URI 'http://www.pharmvar.org' is unknown so the code cannot be validated

Bundle/diagnosticreport-pgxexample: Bundle.entry[8].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l408/c21)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/diagnosticreport-pgxexample: Bundle.entry[8].resource.ofType(Observation) (l364/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype - listed in meta

Bundle/diagnosticreport-pgxexample: Bundle.entry[9].resource.ofType(Observation) (l424/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/diagnosticreport-pgxexample: Bundle.entry[9].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l468/c21)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/diagnosticreport-pgxexample: Bundle.entry[9].resource.ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l485/c21)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/SNP' is unknown so the code cannot be validated

Bundle/diagnosticreport-pgxexample: Bundle.entry[9].resource.ofType(Observation) (l424/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/diagnosticreport-pgxexample: Bundle.entry[9].resource.ofType(Observation).component[1] (l476/c20)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant Show Reasoning

This element does not match any known slicedefined_in_the_profilehttp://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant

Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'conclusion-string')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48018-6')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48001-2')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '62374-4')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48004-6')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48019-4')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'molecular-consequence')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81252-9')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81290-9')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48002-0')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48005-3')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48006-1')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '51958-7')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48013-7')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81258-6')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '82121-5')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '53034-5')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '82155-3')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '69547-8')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '69551-0')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '92822-6')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'exact-start-end')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'outer-start-end')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'inner-start-end')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81291-7')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'variant-inheritance')).exists()
Bundle.entry[9].resource.ofType(Observation).component[1]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48000-4')).exists()

Bundle/diagnosticreport-pgxexample: Bundle.entry[10].resource.ofType(Observation) (l537/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/diagnosticreport-pgxexample: Bundle.entry[10].resource.ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l581/c21)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/diagnosticreport-pgxexample: Bundle.entry[10].resource.ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l598/c21)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

Bundle/diagnosticreport-pgxexample: Bundle.entry[10].resource.ofType(Observation).component[2].value.ofType(CodeableConcept).coding[0] (l613/c21)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/SNP' is unknown so the code cannot be validated

Bundle/diagnosticreport-pgxexample: Bundle.entry[10].resource.ofType(Observation) (l537/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/diagnosticreport-pgxexample: Bundle.entry[10].resource.ofType(Observation).component[2] (l604/c20)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant Show Reasoning

This element does not match any known slicedefined_in_the_profilehttp://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant

Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'conclusion-string')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48018-6')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48001-2')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '62374-4')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48004-6')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48019-4')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'molecular-consequence')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81252-9')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81290-9')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48002-0')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48005-3')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48006-1')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '51958-7')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48013-7')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81258-6')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '82121-5')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '53034-5')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '82155-3')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '69547-8')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '69551-0')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '92822-6')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'exact-start-end')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'outer-start-end')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'inner-start-end')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '81291-7')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/TbdCodes') and (code = 'variant-inheritance')).exists()
Bundle.entry[10].resource.ofType(Observation).component[2]: discriminator = true and code.coding.where((system = 'http://loinc.org') and (code = '48000-4')).exists()

Bundle/diagnosticreport-pgxexample: Bundle.entry[11].resource.ofType(MolecularSequence) (l665/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/MolecularSequence

Bundle/diagnosticreport-pgxexample: Bundle.entry[11].resource.ofType(MolecularSequence).referenceSeq.referenceSeqId.coding[0] (l673/c21)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

Bundle/diagnosticreport-pgxexample: Bundle.entry[12].resource.ofType(MolecularSequence) (l690/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/MolecularSequence

Bundle/diagnosticreport-pgxexample: Bundle.entry[12].resource.ofType(MolecularSequence).referenceSeq.referenceSeqId.coding[0] (l698/c21)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

Bundle/diagnosticreport-pgxexample: Bundle.entry[13].resource.ofType(Task) (l715/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Task

Bundle/diagnosticreport-pgxexample: Bundle.entry[13].resource.ofType(Task) (l715/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/task-med-chg - listed in meta

Bundle/diagnosticreport-pgxexample: Bundle.entry[14].resource.ofType(MedicationStatement) (l750/c15)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/MedicationStatement

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\genotype-hla-a-glstring-r4.xml

Path

Severity

Message

Observation/genotype-hla-a-glstring-r4: Observation (l1/c42)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype

Observation/genotype-hla-a-glstring-r4: Observation.derivedFrom[0] (l57/c18)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype Show Reasoning

Observation/genotype-hla-a-glstring-r4: Observation.derivedFrom[1] (l62/c18)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype Show Reasoning

Observation/genotype-hla-a-glstring-r4: Observation.value.ofType(CodeableConcept).coding[0] (l44/c17)

information

Code System URI 'http://glstring.org' is unknown so the code cannot be validated

Observation/genotype-hla-a-glstring-r4: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l76/c21)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\haplotype-hla-a-1-r4.xml

Path

Severity

Message

Observation/haplotype-hla-a-1-r4: Observation (l1/c42)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype

Observation/haplotype-hla-a-1-r4: Observation.derivedFrom[0] (l57/c18)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype Show Reasoning

Observation/haplotype-hla-a-1-r4: Observation.value.ofType(CodeableConcept).coding[0] (l47/c17)

information

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

Observation/haplotype-hla-a-1-r4: Observation.component[0].value.ofType(CodeableConcept).coding[0] (l71/c21)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\obs-idh-ex.xml

Path

Severity

Message

Observation/obs-idh-ex: Observation (l1/c42)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/diagnostic-implication

Observation/obs-idh-ex: Observation.component[1].value.ofType(CodeableConcept).coding[0] (l71/c12)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/medgen' is unknown so the code cannot be validated

Observation/obs-idh-ex: Observation.component[1].value.ofType(CodeableConcept).coding[1] (l76/c12)

information

Code System URI 'http://www.orpha.net' is unknown so the code cannot be validated

Observation/obs-idh-ex: Observation.component[1].value.ofType(CodeableConcept).coding[2] (l80/c12)

information

Code System URI 'http://www.omim.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-diagnostic.xml

Path

Severity

Message

Bundle/oncology-diagnostic: Bundle (l1/c176)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Bundle

Bundle/oncology-diagnostic: Bundle.entry[0].resource.ofType(Patient) (l6/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Patient

Bundle/oncology-diagnostic: Bundle.entry[1].resource.ofType(Practitioner) (l30/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Practitioner

Bundle/oncology-diagnostic: Bundle.entry[2].resource.ofType(Specimen) (l53/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Specimen

Bundle/oncology-diagnostic: Bundle.entry[2].resource.ofType(Specimen) (l53/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/specimen - listed in meta

Bundle/oncology-diagnostic: Bundle.entry[3].resource.ofType(Observation) (l79/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncology-diagnostic: Bundle.entry[4].resource.ofType(Observation) (l110/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncology-diagnostic: Bundle.entry[4].resource.ofType(Observation).component[2].value.ofType(CodeableConcept).coding[0] (l193/c27)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/clinvar' is unknown so the code cannot be validated

Bundle/oncology-diagnostic: Bundle.entry[4].resource.ofType(Observation).component[5].value.ofType(CodeableConcept).coding[0] (l241/c27)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/oncology-diagnostic: Bundle.entry[4].resource.ofType(Observation) (l110/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/oncology-diagnostic: Bundle.entry[5].resource.ofType(Observation) (l258/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncology-diagnostic: Bundle.entry[5].resource.ofType(Observation) (l258/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/diagnostic-implication - listed in meta

Bundle/oncology-diagnostic: Bundle.entry[5].resource.ofType(Observation).component[2] (l334/c24)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/diagnostic-implication Show Reasoning

Bundle/oncology-diagnostic: Bundle.entry[6].resource.ofType(DiagnosticReport) (l357/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/DiagnosticReport

Bundle/oncology-diagnostic: Bundle.entry[6].resource.ofType(DiagnosticReport) (l357/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-report - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Path

Severity

Message

Bundle/oncology-report-example: Bundle (l1/c2)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Bundle

Bundle/oncology-report-example: Bundle.entry[0].resource.ofType(Organization) (l9/c40)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Organization

Bundle/oncology-report-example: Bundle.entry[1].resource.ofType(Patient) (l27/c35)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Patient

Bundle/oncology-report-example: Bundle.entry[2].resource.ofType(Specimen) (l63/c24)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Specimen

Bundle/oncology-report-example: Bundle.entry[2].resource.ofType(Specimen).collection.method.coding[0] (l66/c16)

information

Code System URI 'http://molit.eu/fhir/IG_TODO' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[2].resource.ofType(Specimen).collection.bodySite.coding[0] (l75/c16)

information

Code System URI 'http://example.org/fhir/sid/icd-9-cm' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[3].resource.ofType(Observation) (l144/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncology-report-example: Bundle.entry[3].resource.ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l183/c18)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[3].resource.ofType(Observation).component[4].value.ofType(CodeableConcept).coding[0] (l243/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[3].resource.ofType(Observation).component[6].value.ofType(CodeableConcept).coding[0] (l283/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[3].resource.ofType(Observation).component[7].value.ofType(CodeableConcept).coding[0] (l303/c18)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[3].resource.ofType(Observation) (l144/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/oncology-report-example: Bundle.entry[4].resource.ofType(Observation) (l419/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncology-report-example: Bundle.entry[4].resource.ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l458/c18)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[4].resource.ofType(Observation).component[4].value.ofType(CodeableConcept).coding[0] (l518/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[4].resource.ofType(Observation).component[6].value.ofType(CodeableConcept).coding[0] (l558/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[4].resource.ofType(Observation).component[7].value.ofType(CodeableConcept).coding[0] (l578/c18)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[4].resource.ofType(Observation) (l419/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/oncology-report-example: Bundle.entry[5].resource.ofType(Observation) (l694/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncology-report-example: Bundle.entry[5].resource.ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l733/c18)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[5].resource.ofType(Observation).component[4].value.ofType(CodeableConcept).coding[0] (l793/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[5].resource.ofType(Observation).component[6].value.ofType(CodeableConcept).coding[0] (l833/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[5].resource.ofType(Observation).component[7].value.ofType(CodeableConcept).coding[0] (l853/c18)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[5].resource.ofType(Observation) (l694/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/oncology-report-example: Bundle.entry[6].resource.ofType(Observation) (l969/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncology-report-example: Bundle.entry[6].resource.ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l1008/c18)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[6].resource.ofType(Observation).component[4].value.ofType(CodeableConcept).coding[0] (l1068/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[6].resource.ofType(Observation).component[6].value.ofType(CodeableConcept).coding[0] (l1108/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[6].resource.ofType(Observation).component[7].value.ofType(CodeableConcept).coding[0] (l1128/c18)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[6].resource.ofType(Observation) (l969/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/oncology-report-example: Bundle.entry[7].resource.ofType(Observation) (l1244/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncology-report-example: Bundle.entry[7].resource.ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l1283/c18)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[7].resource.ofType(Observation).component[4].value.ofType(CodeableConcept).coding[0] (l1343/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[7].resource.ofType(Observation).component[6].value.ofType(CodeableConcept).coding[0] (l1383/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[7].resource.ofType(Observation).component[7].value.ofType(CodeableConcept).coding[0] (l1403/c18)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[7].resource.ofType(Observation) (l1244/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/oncology-report-example: Bundle.entry[8].resource.ofType(Observation) (l1519/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncology-report-example: Bundle.entry[8].resource.ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l1558/c18)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[8].resource.ofType(Observation).component[4].value.ofType(CodeableConcept).coding[0] (l1618/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[8].resource.ofType(Observation).component[6].value.ofType(CodeableConcept).coding[0] (l1658/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[8].resource.ofType(Observation).component[7].value.ofType(CodeableConcept).coding[0] (l1678/c18)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[8].resource.ofType(Observation) (l1519/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/oncology-report-example: Bundle.entry[9].resource.ofType(Observation) (l1794/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncology-report-example: Bundle.entry[9].resource.ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l1833/c18)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[9].resource.ofType(Observation).component[4].value.ofType(CodeableConcept).coding[0] (l1893/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[9].resource.ofType(Observation).component[6].value.ofType(CodeableConcept).coding[0] (l1933/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[9].resource.ofType(Observation).component[7].value.ofType(CodeableConcept).coding[0] (l1953/c18)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[9].resource.ofType(Observation) (l1794/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/oncology-report-example: Bundle.entry[10].resource.ofType(Observation) (l2069/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncology-report-example: Bundle.entry[10].resource.ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l2108/c18)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[10].resource.ofType(Observation).component[4].value.ofType(CodeableConcept).coding[0] (l2168/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[10].resource.ofType(Observation).component[6].value.ofType(CodeableConcept).coding[0] (l2208/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[10].resource.ofType(Observation).component[7].value.ofType(CodeableConcept).coding[0] (l2228/c18)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[10].resource.ofType(Observation) (l2069/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/oncology-report-example: Bundle.entry[11].resource.ofType(Observation) (l2344/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncology-report-example: Bundle.entry[11].resource.ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l2383/c18)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[11].resource.ofType(Observation).component[4].value.ofType(CodeableConcept).coding[0] (l2443/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[11].resource.ofType(Observation).component[6].value.ofType(CodeableConcept).coding[0] (l2483/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[11].resource.ofType(Observation).component[7].value.ofType(CodeableConcept).coding[0] (l2503/c18)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[11].resource.ofType(Observation) (l2344/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/oncology-report-example: Bundle.entry[12].resource.ofType(Observation) (l2619/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncology-report-example: Bundle.entry[12].resource.ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l2658/c18)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[12].resource.ofType(Observation).component[4].value.ofType(CodeableConcept).coding[0] (l2718/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[12].resource.ofType(Observation).component[6].value.ofType(CodeableConcept).coding[0] (l2758/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[12].resource.ofType(Observation).component[7].value.ofType(CodeableConcept).coding[0] (l2778/c18)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[12].resource.ofType(Observation) (l2619/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/oncology-report-example: Bundle.entry[13].resource.ofType(Observation) (l2894/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncology-report-example: Bundle.entry[13].resource.ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l2933/c18)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[13].resource.ofType(Observation).component[4].value.ofType(CodeableConcept).coding[0] (l2993/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[13].resource.ofType(Observation).component[6].value.ofType(CodeableConcept).coding[0] (l3033/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[13].resource.ofType(Observation).component[7].value.ofType(CodeableConcept).coding[0] (l3053/c18)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[13].resource.ofType(Observation) (l2894/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/oncology-report-example: Bundle.entry[14].resource.ofType(Observation) (l3169/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncology-report-example: Bundle.entry[14].resource.ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l3208/c18)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[14].resource.ofType(Observation).component[4].value.ofType(CodeableConcept).coding[0] (l3268/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[14].resource.ofType(Observation).component[6].value.ofType(CodeableConcept).coding[0] (l3308/c18)

information

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[14].resource.ofType(Observation).component[7].value.ofType(CodeableConcept).coding[0] (l3328/c18)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

Bundle/oncology-report-example: Bundle.entry[14].resource.ofType(Observation) (l3169/c22)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/oncology-report-example: Bundle.entry[15].resource.ofType(DiagnosticReport) (l3420/c21)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/DiagnosticReport

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncologyexamples-r4.xml

Path

Severity

Message

Bundle/oncologyexamples-r4: Bundle (l1/c176)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Bundle

Bundle/oncologyexamples-r4: Bundle.entry[0].resource.ofType(Patient) (l6/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Patient

Bundle/oncologyexamples-r4: Bundle.entry[1].resource.ofType(Practitioner) (l30/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Practitioner

Bundle/oncologyexamples-r4: Bundle.entry[2].resource.ofType(Specimen) (l53/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Specimen

Bundle/oncologyexamples-r4: Bundle.entry[2].resource.ofType(Specimen) (l53/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/specimen - listed in meta

Bundle/oncologyexamples-r4: Bundle.entry[3].resource.ofType(Observation) (l79/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncologyexamples-r4: Bundle.entry[4].resource.ofType(Observation) (l109/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncologyexamples-r4: Bundle.entry[5].resource.ofType(Observation) (l134/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncologyexamples-r4: Bundle.entry[5].resource.ofType(Observation) (l134/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/oncologyexamples-r4: Bundle.entry[6].resource.ofType(Observation) (l264/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncologyexamples-r4: Bundle.entry[6].resource.ofType(Observation) (l264/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/oncologyexamples-r4: Bundle.entry[7].resource.ofType(Observation) (l394/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncologyexamples-r4: Bundle.entry[7].resource.ofType(Observation) (l394/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

Bundle/oncologyexamples-r4: Bundle.entry[8].resource.ofType(Observation) (l522/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncologyexamples-r4: Bundle.entry[8].resource.ofType(Observation) (l522/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication - listed in meta

Bundle/oncologyexamples-r4: Bundle.entry[9].resource.ofType(Observation) (l625/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncologyexamples-r4: Bundle.entry[9].resource.ofType(Observation) (l625/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication - listed in meta

Bundle/oncologyexamples-r4: Bundle.entry[10].resource.ofType(Observation) (l726/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncologyexamples-r4: Bundle.entry[10].resource.ofType(Observation) (l726/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication - listed in meta

Bundle/oncologyexamples-r4: Bundle.entry[11].resource.ofType(Observation) (l829/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncologyexamples-r4: Bundle.entry[11].resource.ofType(Observation) (l829/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication - listed in meta

Bundle/oncologyexamples-r4: Bundle.entry[12].resource.ofType(Observation) (l932/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncologyexamples-r4: Bundle.entry[12].resource.ofType(Observation) (l932/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/grouper - listed in meta

Bundle/oncologyexamples-r4: Bundle.entry[12].resource.ofType(Observation).hasMember[3] (l964/c24)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/grouper Show Reasoning

This element does not match any known slicedefined_in_the_profilehttp://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/grouper

Bundle.entry[12].resource.ofType(Observation).hasMember[3]: discriminator = true and resolve().conformsTo('http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/grouper')
Bundle.entry[12].resource.ofType(Observation).hasMember[3]: Profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/grouper does not match for Bundle.entry[12].resource.ofType(Observation) because of the following profile issues:
- resource: Observation.category: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/grouper)
- resource: Observation.category:labCategory: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/grouper)
- resource.code: Expected 1 but found 0 coding elements
Bundle.entry[12].resource.ofType(Observation).hasMember[3]: discriminator = true and resolve().conformsTo('http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/overall-interpretation')
Bundle.entry[12].resource.ofType(Observation).hasMember[3]: Profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/overall-interpretation does not match for Bundle.entry[12].resource.ofType(Observation) because of the following profile issues:
- resource: Observation.category: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/overall-interpretation)
- resource: Observation.category:labCategory: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/overall-interpretation)
- resource.code: Expected 1 but found 0 coding elements
- resource.value.ofType(Quantity): The Profile 'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/overall-interpretation' definition allows for the type CodeableConcept but found type Quantity
- resource.value.ofType(Quantity).value: This element is not allowed by the profile http://hl7.org/fhir/StructureDefinition/CodeableConcept
- resource.value.ofType(Quantity).unit: This element is not allowed by the profile http://hl7.org/fhir/StructureDefinition/CodeableConcept
- resource.value.ofType(Quantity).system: This element is not allowed by the profile http://hl7.org/fhir/StructureDefinition/CodeableConcept
- resource.value.ofType(Quantity).code: This element is not allowed by the profile http://hl7.org/fhir/StructureDefinition/CodeableConcept
Bundle.entry[12].resource.ofType(Observation).hasMember[3]: discriminator = true and resolve().conformsTo('http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/diagnostic-implication')
Bundle.entry[12].resource.ofType(Observation).hasMember[3]: Profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/diagnostic-implication does not match for Bundle.entry[12].resource.ofType(Observation) because of the following profile issues:
- resource: Observation.category: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/diagnostic-implication)
- resource: Observation.category:labCategory: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/diagnostic-implication)
- resource: Observation.value[x]: max allowed = 0, but found 1 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/diagnostic-implication)
- resource: Observation.derivedFrom: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/diagnostic-implication)
- resource.code: Expected 1 but found 0 coding elements
Bundle.entry[12].resource.ofType(Observation).hasMember[3]: discriminator = true and resolve().conformsTo('http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication')
Bundle.entry[12].resource.ofType(Observation).hasMember[3]: Profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication does not match for Bundle.entry[12].resource.ofType(Observation) because of the following profile issues:
- resource: Observation.category: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication)
- resource: Observation.category:labCategory: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication)
- resource: Observation.value[x]: max allowed = 0, but found 1 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication)
- resource: Observation.derivedFrom: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication)
Bundle.entry[12].resource.ofType(Observation).hasMember[3]: discriminator = true and resolve().conformsTo('http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype')
Bundle.entry[12].resource.ofType(Observation).hasMember[3]: Profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype does not match for Bundle.entry[12].resource.ofType(Observation) because of the following profile issues:
- resource: Observation.category: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype)
- resource: Observation.category:labCategory: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype)
- resource.code: Expected 1 but found 0 coding elements
- resource.value.ofType(Quantity): The Profile 'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype' definition allows for the type CodeableConcept but found type Quantity
- resource.value.ofType(Quantity).value: This element is not allowed by the profile http://hl7.org/fhir/StructureDefinition/CodeableConcept
- resource.value.ofType(Quantity).unit: This element is not allowed by the profile http://hl7.org/fhir/StructureDefinition/CodeableConcept
- resource.value.ofType(Quantity).system: This element is not allowed by the profile http://hl7.org/fhir/StructureDefinition/CodeableConcept
- resource.value.ofType(Quantity).code: This element is not allowed by the profile http://hl7.org/fhir/StructureDefinition/CodeableConcept
Bundle.entry[12].resource.ofType(Observation).hasMember[3]: discriminator = true and resolve().conformsTo('http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype')
Bundle.entry[12].resource.ofType(Observation).hasMember[3]: Profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype does not match for Bundle.entry[12].resource.ofType(Observation) because of the following profile issues:
- resource: Observation.category: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype)
- resource: Observation.category:labCategory: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype)
- resource.code: Expected 1 but found 0 coding elements
- resource.value.ofType(Quantity): The Profile 'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype' definition allows for the type CodeableConcept but found type Quantity
- resource.value.ofType(Quantity).value: This element is not allowed by the profile http://hl7.org/fhir/StructureDefinition/CodeableConcept
- resource.value.ofType(Quantity).unit: This element is not allowed by the profile http://hl7.org/fhir/StructureDefinition/CodeableConcept
- resource.value.ofType(Quantity).system: This element is not allowed by the profile http://hl7.org/fhir/StructureDefinition/CodeableConcept
- resource.value.ofType(Quantity).code: This element is not allowed by the profile http://hl7.org/fhir/StructureDefinition/CodeableConcept
Bundle.entry[12].resource.ofType(Observation).hasMember[3]: discriminator = true and resolve().conformsTo('http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant')
Bundle.entry[12].resource.ofType(Observation).hasMember[3]: Profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant does not match for Bundle.entry[12].resource.ofType(Observation) because of the following profile issues:
- resource.value.ofType(Quantity): This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant and slicing is CLOSED: resource.value.ofType(Quantity): Does not match slice 'valueCodeableConcept'
- resource: Observation.category: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant)
- resource: Observation.category:labCategory: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant)
- resource.code: Expected 1 but found 0 coding elements
- resource.value.ofType(Quantity): The Profile 'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant' definition allows for the type CodeableConcept but found type Quantity
- resource.value.ofType(Quantity).value: This element is not allowed by the profile http://hl7.org/fhir/StructureDefinition/CodeableConcept
- resource.value.ofType(Quantity).unit: This element is not allowed by the profile http://hl7.org/fhir/StructureDefinition/CodeableConcept
- resource.value.ofType(Quantity).system: This element is not allowed by the profile http://hl7.org/fhir/StructureDefinition/CodeableConcept
- resource.value.ofType(Quantity).code: This element is not allowed by the profile http://hl7.org/fhir/StructureDefinition/CodeableConcept
Bundle.entry[12].resource.ofType(Observation).hasMember[3]: discriminator = true and resolve().conformsTo('http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/region-studied')
Bundle.entry[12].resource.ofType(Observation).hasMember[3]: Profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/region-studied does not match for Bundle.entry[12].resource.ofType(Observation) because of the following profile issues:
- resource: Observation.category: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/region-studied)
- resource: Observation.category:labCategory: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/region-studied)
- resource: Observation.value[x]: max allowed = 0, but found 1 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/region-studied)
- resource.code: Expected 1 but found 0 coding elements
Bundle.entry[12].resource.ofType(Observation).hasMember[3]: discriminator = true and resolve().conformsTo('http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship')
Bundle.entry[12].resource.ofType(Observation).hasMember[3]: Profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship does not match for Bundle.entry[12].resource.ofType(Observation) because of the following profile issues:
- resource.value.ofType(Quantity): This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship and slicing is CLOSED: resource.value.ofType(Quantity): Does not match slice 'valueCodeableConcept'
- resource: Observation.category: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship)
- resource: Observation.category:labCategory: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship)
- resource: Observation.value[x]:valueCodeableConcept: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship)
- resource.code: Expected 1 but found 0 coding elements
- resource.value.ofType(Quantity): The Profile 'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship' definition allows for the type CodeableConcept but found type Quantity
- resource.value.ofType(Quantity).value: This element is not allowed by the profile http://hl7.org/fhir/StructureDefinition/CodeableConcept
- resource.value.ofType(Quantity).unit: This element is not allowed by the profile http://hl7.org/fhir/StructureDefinition/CodeableConcept
- resource.value.ofType(Quantity).system: This element is not allowed by the profile http://hl7.org/fhir/StructureDefinition/CodeableConcept
- resource.value.ofType(Quantity).code: This element is not allowed by the profile http://hl7.org/fhir/StructureDefinition/CodeableConcept

Bundle/oncologyexamples-r4: Bundle.entry[12].resource.ofType(Observation).hasMember[4] (l968/c24)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/grouper Show Reasoning

This element does not match any known slicedefined_in_the_profilehttp://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/grouper

Bundle.entry[12].resource.ofType(Observation).hasMember[4]: discriminator = true and resolve().conformsTo('http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/grouper')
Bundle.entry[12].resource.ofType(Observation).hasMember[4]: Profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/grouper does not match for Bundle.entry[12].resource.ofType(Observation) because of the following profile issues:
- resource: Observation.category: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/grouper)
- resource: Observation.category:labCategory: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/grouper)
- resource.code: Expected 1 but found 0 coding elements
Bundle.entry[12].resource.ofType(Observation).hasMember[4]: discriminator = true and resolve().conformsTo('http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/overall-interpretation')
Bundle.entry[12].resource.ofType(Observation).hasMember[4]: Profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/overall-interpretation does not match for Bundle.entry[12].resource.ofType(Observation) because of the following profile issues:
- resource: Observation.category: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/overall-interpretation)
- resource: Observation.category:labCategory: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/overall-interpretation)
- resource.code: Expected 1 but found 0 coding elements
- resource.value.ofType(string): The Profile 'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/overall-interpretation' definition allows for the type CodeableConcept but found type string
Bundle.entry[12].resource.ofType(Observation).hasMember[4]: discriminator = true and resolve().conformsTo('http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/diagnostic-implication')
Bundle.entry[12].resource.ofType(Observation).hasMember[4]: Profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/diagnostic-implication does not match for Bundle.entry[12].resource.ofType(Observation) because of the following profile issues:
- resource: Observation.category: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/diagnostic-implication)
- resource: Observation.category:labCategory: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/diagnostic-implication)
- resource: Observation.value[x]: max allowed = 0, but found 1 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/diagnostic-implication)
- resource: Observation.derivedFrom: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/diagnostic-implication)
- resource.code: Expected 1 but found 0 coding elements
Bundle.entry[12].resource.ofType(Observation).hasMember[4]: discriminator = true and resolve().conformsTo('http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication')
Bundle.entry[12].resource.ofType(Observation).hasMember[4]: Profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication does not match for Bundle.entry[12].resource.ofType(Observation) because of the following profile issues:
- resource: Observation.category: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication)
- resource: Observation.category:labCategory: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication)
- resource: Observation.value[x]: max allowed = 0, but found 1 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication)
- resource: Observation.derivedFrom: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/therapeutic-implication)
Bundle.entry[12].resource.ofType(Observation).hasMember[4]: discriminator = true and resolve().conformsTo('http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype')
Bundle.entry[12].resource.ofType(Observation).hasMember[4]: Profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype does not match for Bundle.entry[12].resource.ofType(Observation) because of the following profile issues:
- resource: Observation.category: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype)
- resource: Observation.category:labCategory: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype)
- resource.code: Expected 1 but found 0 coding elements
- resource.value.ofType(string): The Profile 'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype' definition allows for the type CodeableConcept but found type string
Bundle.entry[12].resource.ofType(Observation).hasMember[4]: discriminator = true and resolve().conformsTo('http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype')
Bundle.entry[12].resource.ofType(Observation).hasMember[4]: Profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype does not match for Bundle.entry[12].resource.ofType(Observation) because of the following profile issues:
- resource: Observation.category: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype)
- resource: Observation.category:labCategory: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype)
- resource.code: Expected 1 but found 0 coding elements
- resource.value.ofType(string): The Profile 'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype' definition allows for the type CodeableConcept but found type string
Bundle.entry[12].resource.ofType(Observation).hasMember[4]: discriminator = true and resolve().conformsTo('http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant')
Bundle.entry[12].resource.ofType(Observation).hasMember[4]: Profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant does not match for Bundle.entry[12].resource.ofType(Observation) because of the following profile issues:
- resource.value.ofType(string): This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant and slicing is CLOSED: resource.value.ofType(string): Does not match slice 'valueCodeableConcept'
- resource: Observation.category: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant)
- resource: Observation.category:labCategory: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant)
- resource.code: Expected 1 but found 0 coding elements
- resource.value.ofType(string): The Profile 'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant' definition allows for the type CodeableConcept but found type string
Bundle.entry[12].resource.ofType(Observation).hasMember[4]: discriminator = true and resolve().conformsTo('http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/region-studied')
Bundle.entry[12].resource.ofType(Observation).hasMember[4]: Profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/region-studied does not match for Bundle.entry[12].resource.ofType(Observation) because of the following profile issues:
- resource: Observation.category: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/region-studied)
- resource: Observation.category:labCategory: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/region-studied)
- resource: Observation.value[x]: max allowed = 0, but found 1 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/region-studied)
- resource.code: Expected 1 but found 0 coding elements
Bundle.entry[12].resource.ofType(Observation).hasMember[4]: discriminator = true and resolve().conformsTo('http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship')
Bundle.entry[12].resource.ofType(Observation).hasMember[4]: Profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship does not match for Bundle.entry[12].resource.ofType(Observation) because of the following profile issues:
- resource.value.ofType(string): This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship and slicing is CLOSED: resource.value.ofType(string): Does not match slice 'valueCodeableConcept'
- resource: Observation.category: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship)
- resource: Observation.category:labCategory: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship)
- resource: Observation.value[x]:valueCodeableConcept: minimum required = 1, but only found 0 (from http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship)
- resource.code: Expected 1 but found 0 coding elements
- resource.value.ofType(string): The Profile 'http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship' definition allows for the type CodeableConcept but found type string

Bundle/oncologyexamples-r4: Bundle.entry[13].resource.ofType(Observation) (l983/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

Bundle/oncologyexamples-r4: Bundle.entry[13].resource.ofType(Observation) (l983/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/grouper - listed in meta

Bundle/oncologyexamples-r4: Bundle.entry[14].resource.ofType(DiagnosticReport) (l1029/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/DiagnosticReport

Bundle/oncologyexamples-r4: Bundle.entry[14].resource.ofType(DiagnosticReport) (l1029/c17)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-report - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Path

Severity

Message

DiagnosticReport/report-CYP2C19: DiagnosticReport (l2/c47)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/DiagnosticReport

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[0].ofType(Observation) (l7/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[0].ofType(Observation).component[0].value.ofType(CodeableConcept).coding[0] (l37/c19)

information

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[0].ofType(Observation) (l7/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/region-studied - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[1].ofType(Observation) (l46/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[1].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l99/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[1].ofType(Observation) (l46/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[2].ofType(Observation) (l172/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[2].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l225/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[2].ofType(Observation) (l172/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[3].ofType(Observation) (l298/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[3].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l351/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[3].ofType(Observation) (l298/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[4].ofType(Observation) (l424/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[4].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l477/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[4].ofType(Observation) (l424/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[5].ofType(Observation) (l550/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[5].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l603/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[5].ofType(Observation) (l550/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[6].ofType(Observation) (l676/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[6].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l729/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[6].ofType(Observation) (l676/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[7].ofType(Observation) (l802/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[7].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l855/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[7].ofType(Observation) (l802/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[8].ofType(Observation) (l928/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[8].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l981/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[8].ofType(Observation) (l928/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[9].ofType(Observation) (l1054/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[9].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l1107/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[9].ofType(Observation) (l1054/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[10].ofType(Observation) (l1180/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[10].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l1233/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[10].ofType(Observation) (l1180/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[11].ofType(Observation) (l1306/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[11].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l1359/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[11].ofType(Observation) (l1306/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[12].ofType(Observation) (l1432/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[12].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l1485/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[12].ofType(Observation) (l1432/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[13].ofType(Observation) (l1558/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[13].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l1611/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[13].ofType(Observation) (l1558/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[14].ofType(Observation) (l1684/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[14].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l1737/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[14].ofType(Observation) (l1684/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[15].ofType(Observation) (l1810/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[15].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l1863/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[15].ofType(Observation) (l1810/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[16].ofType(Observation) (l1936/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[16].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l1989/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[16].ofType(Observation) (l1936/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[17].ofType(Observation) (l2062/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[17].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l2115/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[17].ofType(Observation) (l2062/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[18].ofType(Observation) (l2188/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[18].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l2241/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[18].ofType(Observation) (l2188/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[19].ofType(Observation) (l2314/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[19].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l2367/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[19].ofType(Observation) (l2314/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[20].ofType(Observation) (l2440/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[20].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l2493/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[20].ofType(Observation) (l2440/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[21].ofType(Observation) (l2566/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[21].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l2619/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[21].ofType(Observation) (l2566/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[22].ofType(Observation) (l2692/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[22].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l2745/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[22].ofType(Observation) (l2692/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[23].ofType(Observation) (l2818/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[23].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l2871/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[23].ofType(Observation) (l2818/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[24].ofType(Observation) (l2944/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[24].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l2997/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[24].ofType(Observation) (l2944/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[25].ofType(Observation) (l3070/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[25].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l3123/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[25].ofType(Observation) (l3070/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[26].ofType(Observation) (l3196/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[26].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l3249/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[26].ofType(Observation) (l3196/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[27].ofType(Observation) (l3322/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[27].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l3375/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[27].ofType(Observation) (l3322/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[28].ofType(Observation) (l3448/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[28].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l3501/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[28].ofType(Observation) (l3448/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[29].ofType(Observation) (l3574/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[29].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l3627/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[29].ofType(Observation) (l3574/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[30].ofType(Observation) (l3700/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[30].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l3753/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[30].ofType(Observation) (l3700/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[31].ofType(Observation) (l3826/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[31].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l3879/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[31].ofType(Observation) (l3826/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[32].ofType(Observation) (l3952/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[32].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l4005/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[32].ofType(Observation) (l3952/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[33].ofType(Observation) (l4078/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[33].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l4131/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[33].ofType(Observation) (l4078/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[34].ofType(Observation) (l4204/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[34].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l4257/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[34].ofType(Observation) (l4204/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[35].ofType(Observation) (l4330/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[35].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l4383/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[35].ofType(Observation) (l4330/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[36].ofType(Observation) (l4456/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[36].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l4509/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[36].ofType(Observation) (l4456/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[37].ofType(Observation) (l4582/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[37].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l4635/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[37].ofType(Observation) (l4582/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[38].ofType(Observation) (l4708/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[38].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l4761/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[38].ofType(Observation) (l4708/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[39].ofType(Observation) (l4834/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[39].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l4887/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[39].ofType(Observation) (l4834/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[40].ofType(Observation) (l4960/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[40].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l5013/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[40].ofType(Observation) (l4960/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[41].ofType(Observation) (l5086/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[41].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l5139/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[41].ofType(Observation) (l5086/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[42].ofType(Observation) (l5212/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[42].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l5265/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[42].ofType(Observation) (l5212/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[43].ofType(Observation) (l5338/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[43].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l5391/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[43].ofType(Observation) (l5338/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[44].ofType(Observation) (l5464/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[44].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l5517/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[44].ofType(Observation) (l5464/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[45].ofType(Observation) (l5590/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[45].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l5643/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[45].ofType(Observation) (l5590/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[46].ofType(Observation) (l5716/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[46].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l5769/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[46].ofType(Observation) (l5716/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[47].ofType(Observation) (l5842/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[47].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l5895/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[47].ofType(Observation) (l5842/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[48].ofType(Observation) (l5968/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[48].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l6021/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[48].ofType(Observation) (l5968/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[49].ofType(Observation) (l6094/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[49].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l6147/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[49].ofType(Observation) (l6094/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[50].ofType(Observation) (l6220/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[50].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l6273/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[50].ofType(Observation) (l6220/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[51].ofType(Observation) (l6346/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[51].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l6399/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[51].ofType(Observation) (l6346/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[52].ofType(Observation) (l6472/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[52].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l6525/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[52].ofType(Observation) (l6472/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[53].ofType(Observation) (l6598/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[53].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l6651/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[53].ofType(Observation) (l6598/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[54].ofType(Observation) (l6724/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[54].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l6777/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[54].ofType(Observation) (l6724/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[55].ofType(Observation) (l6850/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[55].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l6903/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[55].ofType(Observation) (l6850/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[56].ofType(Observation) (l6976/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[56].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l7029/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[56].ofType(Observation) (l6976/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[57].ofType(Observation) (l7102/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[57].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l7155/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[57].ofType(Observation) (l7102/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[58].ofType(Observation) (l7228/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[58].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l7281/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[58].ofType(Observation) (l7228/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[59].ofType(Observation) (l7354/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[59].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l7407/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[59].ofType(Observation) (l7354/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[60].ofType(Observation) (l7480/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[60].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l7533/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[60].ofType(Observation) (l7480/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[61].ofType(Observation) (l7606/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[61].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l7659/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[61].ofType(Observation) (l7606/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[62].ofType(Observation) (l7732/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[62].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l7785/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[62].ofType(Observation) (l7732/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[63].ofType(Observation) (l7858/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[63].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l7911/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[63].ofType(Observation) (l7858/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[64].ofType(Observation) (l7984/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[64].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l8037/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[64].ofType(Observation) (l7984/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[65].ofType(Observation) (l8110/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[65].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l8163/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[65].ofType(Observation) (l8110/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[66].ofType(Observation) (l8236/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[66].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l8289/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[66].ofType(Observation) (l8236/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[67].ofType(Observation) (l8362/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[67].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l8415/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[67].ofType(Observation) (l8362/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[68].ofType(Observation) (l8488/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[68].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l8541/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[68].ofType(Observation) (l8488/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[69].ofType(Observation) (l8614/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[69].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l8667/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[69].ofType(Observation) (l8614/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[70].ofType(Observation) (l8740/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[70].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l8793/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[70].ofType(Observation) (l8740/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[71].ofType(Observation) (l8866/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[71].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l8919/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[71].ofType(Observation) (l8866/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[72].ofType(Observation) (l8992/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[72].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l9045/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[72].ofType(Observation) (l8992/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[73].ofType(Observation) (l9118/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[73].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l9171/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[73].ofType(Observation) (l9118/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[74].ofType(Observation) (l9244/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[74].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l9297/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[74].ofType(Observation) (l9244/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[75].ofType(Observation) (l9370/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[75].ofType(Observation) (l9370/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship - listed in meta

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[75].ofType(Observation).derivedFrom[0] (l9398/c20)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship Show Reasoning

DiagnosticReport/report-CYP2C19: DiagnosticReport.contained[75].ofType(Observation).derivedFrom[1] (l9401/c20)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship Show Reasoning

DiagnosticReport/report-CYP2C19: DiagnosticReport (l2/c47)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-report - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\sequence-phase-relation-CYP2C19.xml

Path

Severity

Message

DiagnosticReport/sequence-phase-relation-CYP2C19: DiagnosticReport (l2/c47)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/DiagnosticReport

DiagnosticReport/sequence-phase-relation-CYP2C19: DiagnosticReport.contained[0].ofType(Observation) (l8/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/sequence-phase-relation-CYP2C19: DiagnosticReport.contained[0].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l61/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/sequence-phase-relation-CYP2C19: DiagnosticReport.contained[0].ofType(Observation) (l8/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/sequence-phase-relation-CYP2C19: DiagnosticReport.contained[1].ofType(Observation) (l134/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/sequence-phase-relation-CYP2C19: DiagnosticReport.contained[1].ofType(Observation).component[1].value.ofType(CodeableConcept).coding[0] (l187/c19)

information

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

DiagnosticReport/sequence-phase-relation-CYP2C19: DiagnosticReport.contained[1].ofType(Observation) (l134/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant - listed in meta

DiagnosticReport/sequence-phase-relation-CYP2C19: DiagnosticReport.contained[2].ofType(Observation) (l260/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/Observation

DiagnosticReport/sequence-phase-relation-CYP2C19: DiagnosticReport.contained[2].ofType(Observation) (l260/c14)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship - listed in meta

DiagnosticReport/sequence-phase-relation-CYP2C19: DiagnosticReport.contained[2].ofType(Observation).derivedFrom[0] (l288/c20)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship Show Reasoning

DiagnosticReport/sequence-phase-relation-CYP2C19: DiagnosticReport.contained[2].ofType(Observation).derivedFrom[1] (l291/c20)

Slicing Information

This element does not match any known slice defined in the profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship Show Reasoning

DiagnosticReport/sequence-phase-relation-CYP2C19: DiagnosticReport (l2/c47)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-report - listed in meta

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\servicerequest-hla-a-r4.xml

Path

Severity

Message

ServiceRequest/servicerequest-hla-a-r4: ServiceRequest (l1/c45)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/servicerequest

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\specimen-hla-r4.xml

Path

Severity

Message

Specimen/specimen-hla-r4: Specimen (l1/c39)

Process Info

Validate resource against profile http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/specimen

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\genomics-reporting.xml

Path

Severity

Message

ImplementationGuide/hl7.fhir.uv.genomics-reporting: ImplementationGuide

Process Info

Validate resource against profile http://hl7.org/fhir/StructureDefinition/ImplementationGuide

Suppressed Messages (Warnings, hints, broken links)

Add warning and/or information messages here after you've confirmed that they aren't really a problem

The link 'Bundle-diagnosticreport-pgxexample.html#MedicationStatement_current-med-example' for "Generated Summary: type: transaction" cannot be resolved (valid targets: 46 targets)
#broken narrative generation

CodeSystems not supported yet

Error from server: Unable to provide support for code system http://www.genenames.org/geneId
Error from server: Unable to provide support for code system http://sequenceontology.org

LOINC valuesets not recognized yet

The valueSet reference http://loinc.org/vs/LL2353-2 on element Observation.component.value[x] could not be resolved
The valueSet reference http://loinc.org/vs/LL1971-2 on element Observation.valueCodeableConcept could not be resolved
The valueSet reference http://loinc.org/vs/LL4048-6 on element Observation.method could not be resolved
The valueSet reference http://loinc.org/vs/LL4049-4 on element Task.code could not be resolved
The valueSet reference http://loinc.org/vs/LL1040-6 on element Observation.component.value[x] could not be resolved
The valueSet reference http://loinc.org/vs/LL3994-2 on element Observation.value[x] could not be resolved
The valueSet reference http://loinc.org/vs/LL4050-2 on element Observation.method could not be resolved
The valueSet reference http://loinc.org/vs/LL5356-2 on element Observation.component.value[x] could not be resolved
The valueSet reference http://loinc.org/vs/LL3731-8 on element Observation.component.value[x] could not be resolved
The valueSet reference http://loinc.org/vs/LL541-4 on element Observation.value[x] could not be resolved
The valueSet reference http://loinc.org/vs/LL1037-2 on element Task.code could not be resolved
The valueSet reference http://loinc.org/vs/LL378-1 on element Observation.component.value[x] could not be resolved
The valueSet reference http://loinc.org/vs/LL5323-2 on element Observation.component.value[x] could not be resolved
The valueSet reference http://loinc.org/vs/LL1971-2 on element Observation.value[x] could not be resolved
The valueSet reference http://loinc.org/vs/LL4034-6 on element Observation.component.value[x] could not be resolved
The valueSet reference http://loinc.org/vs/LL2938-0 on element Observation.component.value[x] could not be resolved
The valueSet reference http://loinc.org/vs/LL381-5 on element Observation.component.value[x] could not be resolved
The valueSet reference http://loinc.org/vs/LL380-7 on element Observation.component.value[x] could not be resolved
The valueSet reference http://loinc.org/vs/LL3856-3 on element Observation.component.value[x] could not be resolved
The valueSet reference http://loinc.org/vs/LL539-8 on element Observation.component.value[x] could not be resolved
The valueSet reference http://loinc.org/vs/LL3994-2 on element Observation.valueCodeableConcept could not be resolved

ValueSets not recognized yet

[Unable to determine whether the provided codes are in the value set http://loinc.org/vs/LL1037-2 because the value set or code system is not known to the validator]
[Unable to determine whether the provided codes are in the value set http://hl7.org/fhir/uv/genomics-reporting/ValueSet/dna-change-type because the value set or code system is not known to the validator]
[Unable to determine whether the provided codes are in the value set http://hl7.org/fhir/uv/genomics-reporting/ValueSet/hgnc because the value set or code system is not known to the validator]

No suppressed messsages

Errors sorted by type

Terminology_TX_NoValid_3_CC

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\DiagnosticReport-PGxGenomicsReportEMERGE.json

Terminology_TX_System_NotKnown

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\DiagnosticReport-PGxGenomicsReportEMERGE.json

Code System URI 'https://hgsc.bcm.edu/lab-test-codes/' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-GenotypeExample1.json

Code System URI 'http://www.ncbi.nlm.nih.gov/clinvar' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-GenotypeExample1.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-geno-1001.json

Code System URI 'http://www.ncbi.nlm.nih.gov/clinvar' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-geno-1001.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-geno-1002.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-geno-1003.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1011.json

Code System URI 'https://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1011.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1011.json

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1012.json

Code System URI 'https://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1012.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1012.json

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1013.json

Code System URI 'https://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1013.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1013.json

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1014.json

Code System URI 'https://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1014.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1014.json

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1015.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1015.json

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1016.json

Code System URI 'https://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1016.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1016.json

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1017.json

Code System URI 'https://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1017.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1017.json

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1018.json

Code System URI 'https://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1018.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1018.json

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1019.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1019.json

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1020.json

Code System URI 'https://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1020.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1020.json

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1021.json

Code System URI 'https://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1021.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-Pgx-var-1021.json

Code System URI 'http://sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-RegionStudiedPGx1.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-RegionStudiedPGx2.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-RegionStudiedPGx3.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TxImp01.json

Code System URI 'http://ncimeta.nci.nih.gov' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TxImp02.json

Code System URI 'http://ncimeta.nci.nih.gov' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TxImp03.json

Code System URI 'http://ncimeta.nci.nih.gov' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TxImp04.json

Code System URI 'http://ncimeta.nci.nih.gov' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TxImp05.json

Code System URI 'http://ncimeta.nci.nih.gov' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-TxImp06.json

Code System URI 'http://ncimeta.nci.nih.gov' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-VariantExample1.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-VariantExample1.json

Code System URI 'http://www.ncbi.nlm.nih.gov/clinvar' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\Observation-VariantExample2.json

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\fsh-generated\resources\ServiceRequest-eMERGEServiceRequest.json

Code System URI 'https://hgsc.bcm.edu/lab-test-codes/' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/gtr' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/gtr' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://glstring.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/gtr' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/gtr' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/gtr' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://glstring.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/gtr' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/gtr' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/gtr' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://glstring.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/gtr' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\CG-IG-HLA-FullBundle-01.xml

Code System URI 'http://genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\SNVexample.xml

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\SNVexample.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\complexVariant-nonHGVS.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\complexVariant-nonHGVS.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample.xml

Code System URI 'http://example.org/clinvar' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample.xml

Code System URI 'http://example.org/cigar' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample.xml

Code System URI 'http://example.org/hgnc' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample.xml

Code System URI 'http://example.org/dbsnp' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample.xml

Code System URI 'http://example.org/Chrom-Loc' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample.xml

Code System URI 'http://example.org/MedGen-Dis' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample.xml

Code System URI 'http://example.org/clinvar' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample.xml

Code System URI 'http://example.org/RefSeq-T' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample.xml

Code System URI 'http://example.org/clinvar' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample.xml

Code System URI 'http://example.org/RefSeq-T' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample.xml

Code System URI 'http://example.org/???' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample.xml

Code System URI 'http://www.pharmvar.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample.xml

Code System URI 'http://example.org/hgnc' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample.xml

Code System URI 'http://example.org/hgnc' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample.xml

Code System URI 'http://www.pharmvar.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample.xml

Code System URI 'http://example.org/hgnc' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-cgexample.xml

Code System URI 'http://example.org/hgnc' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-hla-glstring-r4.xml

Code System URI 'http://genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-pgxexample.xml

Code System URI 'http://www.pharmvar.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-pgxexample.xml

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-pgxexample.xml

Code System URI 'http://www.pharmvar.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-pgxexample.xml

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-pgxexample.xml

Code System URI 'http://www.pharmvar.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-pgxexample.xml

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-pgxexample.xml

Code System URI 'http://www.pharmvar.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-pgxexample.xml

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-pgxexample.xml

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-pgxexample.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/SNP' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-pgxexample.xml

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-pgxexample.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-pgxexample.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/SNP' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-pgxexample.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\diagnosticreport-pgxexample.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\genotype-hla-a-glstring-r4.xml

Code System URI 'http://glstring.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\genotype-hla-a-glstring-r4.xml

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\haplotype-hla-a-1-r4.xml

Code System URI 'http://www.ebi.ac.uk/ipd/imgt/hla' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\haplotype-hla-a-1-r4.xml

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\obs-idh-ex.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/medgen' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\obs-idh-ex.xml

Code System URI 'http://www.orpha.net' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\obs-idh-ex.xml

Code System URI 'http://www.omim.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-diagnostic.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/clinvar' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-diagnostic.xml

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://molit.eu/fhir/IG_TODO' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://example.org/fhir/sid/icd-9-cm' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.sequenceontology.org' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\oncology-report-example.json

Code System URI 'http://www.ncbi.nlm.nih.gov/refseq' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.genenames.org/geneId' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\report-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\sequence-phase-relation-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated

C:\temp\hl7.fhir.uv.genomics-reporting#1.1.0\input\examples\sequence-phase-relation-CYP2C19.xml

Code System URI 'http://www.ncbi.nlm.nih.gov/nuccore' is unknown so the code cannot be validated