This page is part of the Genetic Reporting Implementation Guide (v0.3.0: STU 1 Ballot 2) based on FHIR R4. The current version which supercedes this version is 2.0.0. For a full list of available versions, see the Directory of published versions

Example - Pharmacogenomics

Format(s):

Narrative view

Bundle diagnosticreport-pgxexample of type collection

Entry 1 - Full URL = http://hl7.org/fhir/uv/genomics-reporting/DiagnosticReport/pgx-report

Resource DiagnosticReport:

Entry 2 - Full URL = http://hl7.org/fhir/uv/genomics-reporting/Patient/patient

Resource Patient:

This would contain patient identifiers, demographics, etc.

Entry 3 - Full URL = http://hl7.org/fhir/uv/genomics-reporting/Specimen/specimen

Resource Specimen:

TODO

Entry 4 - Full URL = http://hl7.org/fhir/uv/genomics-reporting/Organization/lab

Resource Organization:

TODO

Entry 5 - Full URL = http://hl7.org/fhir/uv/genomics-reporting/ServiceRequest/pgx-request

Resource ServiceRequest:

TODO

Entry 6 - Full URL = http://hl7.org/fhir/uv/genomics-reporting/Observation/med-impact-pgx-example

Resource Observation:

Entry 7 - Full URL = http://hl7.org/fhir/uv/genomics-reporting/Observation/genotype-pgx-example

Resource Observation:

Entry 8 - Full URL = http://hl7.org/fhir/uv/genomics-reporting/Observation/haplotype-1-pgx-example

Resource Observation:

Entry 9 - Full URL = http://hl7.org/fhir/uv/genomics-reporting/Observation/haplotype-2-pgx-example

Resource Observation:

Entry 10 - Full URL = http://hl7.org/fhir/uv/genomics-reporting/Observation/variant-1-pgx-example

Resource Observation:

Entry 11 - Full URL = http://hl7.org/fhir/uv/genomics-reporting/Observation/variant-2-pgx-example

Resource Observation:

Entry 12 - Full URL = http://hl7.org/fhir/uv/genomics-reporting/MolecularSequence/sequence-1-pgx-example

Resource MolecularSequence:

Entry 13 - Full URL = http://hl7.org/fhir/uv/genomics-reporting/MolecularSequence/sequence-2-pgx-example

Resource MolecularSequence:

Entry 14 - Full URL = http://hl7.org/fhir/uv/genomics-reporting/Task/med-usage-impact-task-pgx-example

Resource Task:

Entry 15 - Full URL = http://hl7.org/fhir/uv/genomics-reporting/MedicationStatement/current-med-example

Resource MedicationStatement: