Left: | US Core Specimen Profile (http://hl7.org/fhir/us/core/StructureDefinition/us-core-specimen) |
Right: | Human Specimen Profile (http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-human-specimen) |
Error | StructureDefinition.url | Values for url differ: 'http://hl7.org/fhir/us/core/StructureDefinition/us-core-specimen' vs 'http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-human-specimen' |
Error | StructureDefinition.version | Values for version differ: '6.1.0' vs '3.0.0' |
Information | StructureDefinition.name | Values for name differ: 'USCoreSpecimenProfile' vs 'HumanSpecimen' |
Information | StructureDefinition.title | Values for title differ: 'US Core Specimen Profile' vs 'Human Specimen Profile' |
Information | StructureDefinition.status | Values for status differ: 'active' vs 'draft' |
Information | StructureDefinition.date | Values for date differ: '2022-09-27' vs '2023-10-25T23:24:11+00:00' |
Information | StructureDefinition.publisher | Values for publisher differ: 'HL7 International - Cross-Group Projects' vs 'HL7 International / Clinical Interoperability Council' |
Information | StructureDefinition.definition | Values for definition differ: '\-' vs 'A sample to be used for analysis.' |
Warning | Specimen.identifier | Elements differ in definition for mustSupport: 'false' vs 'true' |
Warning | Specimen.status | Elements differ in definition for mustSupport: 'false' vs 'true' |
Information | StructureDefinition.short | Values for short differ: '(USCDI) Kind of material that forms the specimen' vs 'Kind of material that forms the specimen' |
Information | Specimen.type | Element minimum cardinalities differ: '1' vs '0' |
Error | Specimen.type | Unable to resolve left value set http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1099.54 at Specimen.type |
Information | StructureDefinition.short | Values for short differ: '(USCDI) The patient where the specimen came from.' vs 'Where the specimen came from. This may be from patient(s), from a location (e.g., the source of an environmental sample), or a sampling of a substance or a device' |
Information | StructureDefinition.definition | Values for definition differ: 'Where the specimen came from. This may be from patient(s), from a location (e.g., the source of an environmental sample), or a sampling of a substance or a device.' vs 'The patient associated with this specimen.' |
Warning | Specimen.collection | Elements differ in definition for mustSupport: 'false' vs 'true' |
Warning | Specimen.collection.bodySite | Elements differ in definition for mustSupport: 'false' vs 'true' |
Name | Value | Comments | |
---|---|---|---|
abstract | false | ||
baseDefinition | http://hl7.org/fhir/StructureDefinition/Specimen | ||
copyright | Used by permission of HL7 International, all rights reserved Creative Commons License |
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date | 2022-09-27 | 2023-10-25T23:24:11+00:00 |
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description | This profile sets minimum expectations for the Specimen resource to record, search, and fetch "substances being sampled or tested. (e.g., nasopharyngeal swab, whole blood, serum, urine, wound swab)" associated with a patient to promote interoperability and adoption through common implementation. It identifies which core elements, extensions, vocabularies, and value sets **SHALL** be present in the resource and constrains the way the elements are used when using this profile. It provides the floor for standards development for specific use cases. | A specimen taken from a Patient for the purpose of oncology-related testing. The profile includes extensions to specify a more precise body site and an identifier of source body structure at that site (for example, a tumor identifier). |
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experimental | false |
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fhirVersion | 4.0.1 | ||
jurisdiction | |||
jurisdiction[0] | urn:iso:std:iso:3166#US | ||
kind | resource | ||
name | USCoreSpecimenProfile | HumanSpecimen |
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publisher | HL7 International - Cross-Group Projects | HL7 International / Clinical Interoperability Council |
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purpose | |||
status | active | draft |
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title | US Core Specimen Profile | Human Specimen Profile |
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type | Specimen | ||
url | http://hl7.org/fhir/us/core/StructureDefinition/us-core-specimen | http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-human-specimen |
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version | 6.1.0 | 3.0.0 |
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Name | L Flags | L Card. | L Type | L Description & Constraints | R Flags | R Card. | L Type | L Description & Constraints | Comments | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Specimen | 0..* | Specimen | Sample for analysis | 0..* | Specimen | Sample for analysis | |||||||||||
id | Σ | 0..1 | id | Logical id of this artifact | Σ | 0..1 | id | Logical id of this artifact | |||||||||
meta | Σ | 0..1 | Meta | Metadata about the resource | Σ | 0..1 | Meta | Metadata about the resource | |||||||||
implicitRules | ?!Σ | 0..1 | uri | A set of rules under which this content was created | ?!Σ | 0..1 | uri | A set of rules under which this content was created | |||||||||
language | 0..1 | code | Language of the resource content Binding: ?? (preferred): A human language.
| 0..1 | code | Language of the resource content Binding: ?? (preferred): A human language.
| |||||||||||
text | 0..1 | Narrative | Text summary of the resource, for human interpretation | 0..1 | Narrative | Text summary of the resource, for human interpretation | |||||||||||
contained | 0..* | Resource | Contained, inline Resources | 0..* | Resource | Contained, inline Resources | |||||||||||
extension | 0..* | Extension | Additional content defined by implementations | 0..* | Extension | Additional content defined by implementations | |||||||||||
modifierExtension | ?! | 0..* | Extension | Extensions that cannot be ignored | ?! | 0..* | Extension | Extensions that cannot be ignored | |||||||||
identifier | Σ | 0..* | Identifier | External Identifier | SΣ | 0..* | Identifier | External Identifier Slice: Unordered, Open by pattern:type |
| ||||||||
accessionIdentifier | Σ | 0..1 | Identifier | Identifier assigned by the lab | Σ | 0..1 | Identifier | Identifier assigned by the lab | |||||||||
status | ?!Σ | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error Binding: ?? (required): Codes providing the status/availability of a specimen. | ?!SΣ | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error Binding: ?? (required): Codes providing the status/availability of a specimen. |
| ||||||||
type | SΣ | 1..1 | CodeableConcept | (USCDI) Kind of material that forms the specimen Binding: ?? (extensible) | SΣ | 0..1 | CodeableConcept | Kind of material that forms the specimen Binding: ?? (extensible) |
| ||||||||
subject | SΣ | 0..1 | Reference(US Core Patient Profile) | (USCDI) The patient where the specimen came from. | SΣ | 0..1 | Reference(Cancer Patient Profile) | Where the specimen came from. This may be from patient(s), from a location (e.g., the source of an environmental sample), or a sampling of a substance or a device | |||||||||
receivedTime | Σ | 0..1 | dateTime | The time when specimen was received for processing | Σ | 0..1 | dateTime | The time when specimen was received for processing | |||||||||
parent | 0..* | Reference(Specimen) | Specimen from which this specimen originated | 0..* | Reference(Specimen) | Specimen from which this specimen originated | |||||||||||
request | 0..* | Reference(ServiceRequest) | Why the specimen was collected | 0..* | Reference(ServiceRequest) | Why the specimen was collected | |||||||||||
collection | 0..1 | BackboneElement | Collection details | S | 0..1 | BackboneElement | Collection details |
| |||||||||
id | 0..1 | string | Unique id for inter-element referencing | 0..1 | string | Unique id for inter-element referencing | |||||||||||
extension | 0..* | Extension | Additional content defined by implementations | 0..* | Extension | Additional content defined by implementations | |||||||||||
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized | |||||||||
collector | Σ | 0..1 | Reference(Practitioner | PractitionerRole) | Who collected the specimen | Σ | 0..1 | Reference(Practitioner | PractitionerRole) | Who collected the specimen | |||||||||
collected[x] | Σ | 0..1 | dateTime, Period | Collection time | Σ | 0..1 | dateTime, Period | Collection time | |||||||||
duration | Σ | 0..1 | Duration | How long it took to collect specimen | Σ | 0..1 | Duration | How long it took to collect specimen | |||||||||
quantity | 0..1 | ?? | The quantity of specimen collected | 0..1 | ?? | The quantity of specimen collected | |||||||||||
method | 0..1 | CodeableConcept | Technique used to perform collection Binding: ?? (example): The technique that is used to perform the procedure. | 0..1 | CodeableConcept | Technique used to perform collection Binding: ?? (example): The technique that is used to perform the procedure. | |||||||||||
bodySite | 0..1 | CodeableConcept | Anatomical collection site Binding: ?? (example): Codes describing anatomical locations. May include laterality. | S | 0..1 | CodeableConcept | Anatomical collection site Binding: ?? (example): Codes describing anatomical locations. May include laterality. |
| |||||||||
id | 0..1 | string | Unique id for inter-element referencing |
| |||||||||||||
Slices for extension | S | 0..* | Extension | Extension Slice: Unordered, Open by value:url |
| ||||||||||||
coding | Σ | 0..* | Coding | Code defined by a terminology system |
| ||||||||||||
text | Σ | 0..1 | string | Plain text representation of the concept |
| ||||||||||||
fastingStatus[x] | Σ | 0..1 | CodeableConcept, Duration | Whether or how long patient abstained from food and/or drink Binding: ?? (extensible): Codes describing the fasting status of the patient. | Σ | 0..1 | CodeableConcept, Duration | Whether or how long patient abstained from food and/or drink Binding: ?? (extensible): Codes describing the fasting status of the patient. | |||||||||
processing | 0..* | BackboneElement | Processing and processing step details | 0..* | BackboneElement | Processing and processing step details | |||||||||||
id | 0..1 | string | Unique id for inter-element referencing | 0..1 | string | Unique id for inter-element referencing | |||||||||||
extension | 0..* | Extension | Additional content defined by implementations | 0..* | Extension | Additional content defined by implementations | |||||||||||
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized | |||||||||
description | 0..1 | string | Textual description of procedure | 0..1 | string | Textual description of procedure | |||||||||||
procedure | 0..1 | CodeableConcept | Indicates the treatment step applied to the specimen Binding: ?? (example): Type indicating the technique used to process the specimen. | 0..1 | CodeableConcept | Indicates the treatment step applied to the specimen Binding: ?? (example): Type indicating the technique used to process the specimen. | |||||||||||
additive | 0..* | Reference(Substance) | Material used in the processing step | 0..* | Reference(Substance) | Material used in the processing step | |||||||||||
time[x] | 0..1 | dateTime, Period | Date and time of specimen processing | 0..1 | dateTime, Period | Date and time of specimen processing | |||||||||||
container | 0..* | BackboneElement | Direct container of specimen (tube/slide, etc.) | 0..* | BackboneElement | Direct container of specimen (tube/slide, etc.) | |||||||||||
id | 0..1 | string | Unique id for inter-element referencing | 0..1 | string | Unique id for inter-element referencing | |||||||||||
extension | 0..* | Extension | Additional content defined by implementations | 0..* | Extension | Additional content defined by implementations | |||||||||||
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized | |||||||||
identifier | Σ | 0..* | Identifier | Id for the container | Σ | 0..* | Identifier | Id for the container | |||||||||
description | 0..1 | string | Textual description of the container | 0..1 | string | Textual description of the container | |||||||||||
type | 0..1 | CodeableConcept | Kind of container directly associated with specimen Binding: ?? (example): Type of specimen container. | 0..1 | CodeableConcept | Kind of container directly associated with specimen Binding: ?? (example): Type of specimen container. | |||||||||||
capacity | 0..1 | ?? | Container volume or size | 0..1 | ?? | Container volume or size | |||||||||||
specimenQuantity | 0..1 | ?? | Quantity of specimen within container | 0..1 | ?? | Quantity of specimen within container | |||||||||||
additive[x] | 0..1 | CodeableConcept, Reference(Substance) | Additive associated with container Binding: ?? (example): Substance added to specimen container. | 0..1 | CodeableConcept, Reference(Substance) | Additive associated with container Binding: ?? (example): Substance added to specimen container. | |||||||||||
condition | Σ | 0..* | CodeableConcept | State of the specimen Binding: ?? (extensible): Codes describing the state of the specimen. | Σ | 0..* | CodeableConcept | State of the specimen Binding: ?? (extensible): Codes describing the state of the specimen. | |||||||||
note | 0..* | Annotation | Comments | 0..* | Annotation | Comments | |||||||||||
Documentation for this format |