minimal Common Oncology Data Elements (mCODE) Implementation Guide
2.0.0 - STU 2

This page is part of the HL7 FHIR Implementation Guide: minimal Common Oncology Data Elements (mCODE) Release 1 - US Realm | STU1 (v2.0.0: STU 2) based on FHIR R4. This is the current published version in its permanent home (it will always be available at this URL). For a full list of available versions, see the Directory of published versions

: ClinVar Value Set - XML Representation

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<ValueSet xmlns="http://hl7.org/fhir">
  <id value="mcode-clinvar-vs"/>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><ul><li>Include all codes defined in <a href="http://www.ncbi.nlm.nih.gov/clinvar"><code>http://www.ncbi.nlm.nih.gov/clinvar</code></a></li></ul></div>
  </text>
  <url value="http://hl7.org/fhir/us/mcode/ValueSet/mcode-clinvar-vs"/>
  <version value="2.0.0"/>
  <name value="ClinVarVS"/>
  <title value="ClinVar Value Set"/>
  <status value="active"/>
  <date value="2022-01-18T03:17:40+00:00"/>
  <publisher value="HL7 International Clinical Interoperability Council"/>
  <contact>
    <name value="HL7 International Clinical Interoperability Council"/>
    <telecom>
      <system value="url"/>
      <value value="http://www.hl7.org/Special/committees/cic"/>
    </telecom>
    <telecom>
      <system value="email"/>
      <value value="ciclist@lists.HL7.org"/>
    </telecom>
  </contact>
  <description
               value="Value set of human genomic variants, drawn from [ClinVar](https://www.ncbi.nlm.nih.gov/clinvar/). The codes in this value set refer to the ClinVar Variation ID, or the identifier for the variant or set of variants that were interpreted. [Source: NCBI ClinVar Data Dictionary](https://www.ncbi.nlm.nih.gov/projects/clinvar/ClinVarDataDictionary.pdf)"/>
  <jurisdiction>
    <coding>
      <system value="urn:iso:std:iso:3166"/>
      <code value="US"/>
      <display value="United States of America"/>
    </coding>
  </jurisdiction>
  <compose>
    <include>
      <system value="http://www.ncbi.nlm.nih.gov/clinvar"/>
    </include>
  </compose>
</ValueSet>