Profile Comparison between http://hl7.org/fhir/us/core/StructureDefinition/us-core-specimen vs http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-genomic-specimen

Messages

Metadata

Name	Value		Comments
abstract	false
baseDefinition	http://hl7.org/fhir/StructureDefinition/Specimen
copyright	Used by permission of HL7 International, all rights reserved Creative Commons License		Removed the item 'Used by permission of HL7 International, all rights reserved Creative Commons License'
date	2022-09-27	2023-03-21T04:50:14+11:00	Values Differ
description	This profile sets minimum expectations for the Specimen resource to record, search, and fetch "substances being sampled or tested. (e.g., nasopharyngeal swab, whole blood, serum, urine, wound swab)" associated with a patient to promote interoperability and adoption through common implementation. It identifies which core elements, extensions, vocabularies, and value sets **SHALL** be present in the resource when using this profile. It provides the floor for standards development for specific use cases.	A small sample of blood, hair, skin, amniotic fluid (the fluid that surrounds a fetus during pregnancy), or other tissue which is excised from a subject for the purposes of genomics testing or analysis.	Values Differ
experimental	false		Removed the item 'false'
fhirVersion	4.0.1
jurisdiction
jurisdiction[0]	urn:iso:std:iso:3166#US
kind	resource
name	USCoreSpecimenProfile	GenomicSpecimen	Values Differ
publisher	HL7 International - Cross-Group Projects	HL7 International Clinical Interoperability Council	Values Differ
purpose
status	active
title	US Core Specimen Profile	Genomic Specimen Profile	Values Differ
type	Specimen
url	http://hl7.org/fhir/us/core/StructureDefinition/us-core-specimen	http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-genomic-specimen	Values Differ
version	6.0.0-ballot	2.1.0	Values Differ

Structure

Name	L Flags	L Card.	L Type	L Description & Constraints	R Flags	R Card.	L Type	L Description & Constraints	Comments
Specimen		0..*	Specimen	Sample for analysis		0..*	Specimen	Sample for analysis	Elements differ in definition: '\-' vs 'A sample to be used for analysis.'
id	Σ	0..1	id	Logical id of this artifact	Σ	0..1	id	Logical id of this artifact
meta	Σ	0..1	Meta	Metadata about the resource	Σ	0..1	Meta	Metadata about the resource
implicitRules	?!Σ	0..1	uri	A set of rules under which this content was created	?!Σ	0..1	uri	A set of rules under which this content was created
language		0..1	code	Language of the resource content Binding: ?? (preferred): A human language. Additional Bindings Purpose ?? Max Binding		0..1	code	Language of the resource content Binding: ?? (preferred): A human language. Additional Bindings Purpose ?? Max Binding
text		0..1	Narrative	Text summary of the resource, for human interpretation		0..1	Narrative	Text summary of the resource, for human interpretation
contained		0..*	Resource	Contained, inline Resources		0..*	Resource	Contained, inline Resources
extension		0..*	Extension	Additional content defined by implementations		0..*	Extension	Extension Slice: Unordered, Open by value:url	Elements differ in short: 'Additional content defined by implementations' vs 'Extension' Elements differ in definition: 'May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.' vs 'An Extension'
modifierExtension	?!	0..*	Extension	Extensions that cannot be ignored	?!	0..*	Extension	Extensions that cannot be ignored
identifier	Σ	0..*	Identifier	External Identifier	Σ	0..*	Identifier	External Identifier
accessionIdentifier	Σ	0..1	Identifier	Identifier assigned by the lab	Σ	0..1	Identifier	Identifier assigned by the lab
status	?!Σ	0..1	code	available | unavailable | unsatisfactory | entered-in-error Binding: ?? (required): Codes providing the status/availability of a specimen.	?!SΣ	0..1	code	available | unavailable | unsatisfactory | entered-in-error Binding: ?? (required): Codes providing the status/availability of a specimen.	Elements differ in definition for mustSupport: 'false' vs 'true'
type	SΣ	1..1	CodeableConcept	Kind of material that forms the specimen Binding: ?? (extensible)	SΣ	1..1	CodeableConcept	Kind of material that forms the specimen Binding: ?? (extensible)	Unable to resolve left value set http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1099.54 at Specimen.type
subject	Σ	0..1	Reference(Patient | Group | Device | Substance | Location)	Where the specimen came from. This may be from patient(s), from a location (e.g., the source of an environmental sample), or a sampling of a substance or a device	SΣ	0..1	Reference(Cancer Patient Profile)	Where the specimen came from. This may be from patient(s), from a location (e.g., the source of an environmental sample), or a sampling of a substance or a device	Elements differ in definition: 'Where the specimen came from. This may be from patient(s), from a location (e.g., the source of an environmental sample), or a sampling of a substance or a device.' vs 'The patient associated with this specimen.' Elements differ in definition for mustSupport: 'false' vs 'true'
receivedTime	Σ	0..1	dateTime	The time when specimen was received for processing	Σ	0..1	dateTime	The time when specimen was received for processing
parent		0..*	Reference(Specimen)	Specimen from which this specimen originated		0..*	Reference(Specimen)	Specimen from which this specimen originated
request		0..*	Reference(ServiceRequest)	Why the specimen was collected		0..*	Reference(ServiceRequest)	Why the specimen was collected
collection		0..1	BackboneElement	Collection details	S	0..1	BackboneElement	Collection details	Elements differ in definition for mustSupport: 'false' vs 'true'
id		0..1	string	Unique id for inter-element referencing		0..1	string	Unique id for inter-element referencing
extension		0..*	Extension	Additional content defined by implementations		0..*	Extension	Additional content defined by implementations
modifierExtension	?!Σ	0..*	Extension	Extensions that cannot be ignored even if unrecognized	?!Σ	0..*	Extension	Extensions that cannot be ignored even if unrecognized
collector	Σ	0..1	Reference(Practitioner | PractitionerRole)	Who collected the specimen	Σ	0..1	Reference(Practitioner | PractitionerRole)	Who collected the specimen
collected[x]	Σ	0..1	dateTime, Period	Collection time	Σ	0..1	dateTime, Period	Collection time
duration	Σ	0..1	Duration	How long it took to collect specimen	Σ	0..1	Duration	How long it took to collect specimen
quantity		0..1	??	The quantity of specimen collected		0..1	??	The quantity of specimen collected
method		0..1	CodeableConcept	Technique used to perform collection Binding: ?? (example): The technique that is used to perform the procedure.		0..1	CodeableConcept	Technique used to perform collection Binding: ?? (example): The technique that is used to perform the procedure.
bodySite		0..1	CodeableConcept	Anatomical collection site Binding: ?? (example): Codes describing anatomical locations. May include laterality.	S	0..1	CodeableConcept	Anatomical collection site Binding: ?? (example): Codes describing anatomical locations. May include laterality.	Elements differ in definition for mustSupport: 'false' vs 'true'
id		0..1	string	Unique id for inter-element referencing		0..1	string	Unique id for inter-element referencing
Slices for extension		0..*	Extension	Additional content defined by implementations Slice: Unordered, Open by value:url	S	0..*	Extension	Extension Slice: Unordered, Open by value:url	Elements differ in short: 'Additional content defined by implementations' vs 'Extension' Elements differ in definition: 'May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.' vs 'An Extension' Elements differ in definition for mustSupport: 'false' vs 'true'
coding	Σ	0..*	Coding	Code defined by a terminology system	Σ	0..*	Coding	Code defined by a terminology system
text	Σ	0..1	string	Plain text representation of the concept	Σ	0..1	string	Plain text representation of the concept
fastingStatus[x]	Σ	0..1	CodeableConcept, Duration	Whether or how long patient abstained from food and/or drink Binding: ?? (extensible): Codes describing the fasting status of the patient.	Σ	0..1	CodeableConcept, Duration	Whether or how long patient abstained from food and/or drink Binding: ?? (extensible): Codes describing the fasting status of the patient.
processing		0..*	BackboneElement	Processing and processing step details		0..*	BackboneElement	Processing and processing step details
id		0..1	string	Unique id for inter-element referencing		0..1	string	Unique id for inter-element referencing
extension		0..*	Extension	Additional content defined by implementations		0..*	Extension	Additional content defined by implementations
modifierExtension	?!Σ	0..*	Extension	Extensions that cannot be ignored even if unrecognized	?!Σ	0..*	Extension	Extensions that cannot be ignored even if unrecognized
description		0..1	string	Textual description of procedure		0..1	string	Textual description of procedure
procedure		0..1	CodeableConcept	Indicates the treatment step applied to the specimen Binding: ?? (example): Type indicating the technique used to process the specimen.		0..1	CodeableConcept	Indicates the treatment step applied to the specimen Binding: ?? (example): Type indicating the technique used to process the specimen.
additive		0..*	Reference(Substance)	Material used in the processing step		0..*	Reference(Substance)	Material used in the processing step
time[x]		0..1	dateTime, Period	Date and time of specimen processing		0..1	dateTime, Period	Date and time of specimen processing
container		0..*	BackboneElement	Direct container of specimen (tube/slide, etc.)		0..*	BackboneElement	Direct container of specimen (tube/slide, etc.)
id		0..1	string	Unique id for inter-element referencing		0..1	string	Unique id for inter-element referencing
extension		0..*	Extension	Additional content defined by implementations		0..*	Extension	Additional content defined by implementations
modifierExtension	?!Σ	0..*	Extension	Extensions that cannot be ignored even if unrecognized	?!Σ	0..*	Extension	Extensions that cannot be ignored even if unrecognized
identifier	Σ	0..*	Identifier	Id for the container	Σ	0..*	Identifier	Id for the container
description		0..1	string	Textual description of the container		0..1	string	Textual description of the container
type		0..1	CodeableConcept	Kind of container directly associated with specimen Binding: ?? (example): Type of specimen container.		0..1	CodeableConcept	Kind of container directly associated with specimen Binding: ?? (example): Type of specimen container.
capacity		0..1	??	Container volume or size		0..1	??	Container volume or size
specimenQuantity		0..1	??	Quantity of specimen within container		0..1	??	Quantity of specimen within container
additive[x]		0..1	CodeableConcept, Reference(Substance)	Additive associated with container Binding: ?? (example): Substance added to specimen container.		0..1	CodeableConcept, Reference(Substance)	Additive associated with container Binding: ?? (example): Substance added to specimen container.
condition	Σ	0..*	CodeableConcept	State of the specimen Binding: ?? (extensible): Codes describing the state of the specimen.	Σ	0..*	CodeableConcept	State of the specimen Binding: ?? (extensible): Codes describing the state of the specimen.
note		0..*	Annotation	Comments		0..*	Annotation	Comments
Documentation for this format