This page is part of the HL7 FHIR Implementation Guide: minimal Common Oncology Data Elements (mCODE) Release 1 - US Realm | STU1 (v1.0.0: STU 1) based on FHIR R4. The current version which supercedes this version is 2.0.0. For a full list of available versions, see the Directory of published versions

mCODECancerGenomicsReportExample01 - XML Representation

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<DiagnosticReport xmlns="http://hl7.org/fhir">
  <id value="mCODECancerGenomicsReportExample01"/>
  <meta>
    <profile
             value="http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-cancer-genomics-report"/>
  </meta>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative with Details</b></p><p><b>id</b>: mCODECancerGenomicsReportExample01</p><p><b>meta</b>: </p><p><b>status</b>: final</p><p><b>category</b>: Laboratory <span style="background: LightGoldenRodYellow">(Details : {http://terminology.hl7.org/CodeSystem/v2-0074 code 'LAB' = 'Laboratory)</span>, Genetics <span style="background: LightGoldenRodYellow">(Details : {http://terminology.hl7.org/CodeSystem/v2-0074 code 'GE' = 'Genetics)</span></p><p><b>code</b>: Master HL7 genetic variant reporting panel <span style="background: LightGoldenRodYellow">(Details : {LOINC code '81247-9' = 'Master HL7 genetic variant reporting panel)</span></p><p><b>subject</b>: <a href="DiagnosticReport-mCODECancerGenomicsReportExample01.html">Generated Summary: id: mCODEPatientExample01; Medical record number = m123 (USUAL); John B. Anyperson ; gender: male; birthDate: 1951-01-20</a></p><p><b>effective</b>: Apr 1, 2019 12:00:00 AM</p><p><b>issued</b>: Apr 1, 2019 12:45:33 AM</p><p><b>specimen</b>: <a href="DiagnosticReport-mCODECancerGenomicsReportExample01.html">Generated Summary: id: mCODEGeneticSpecimenExample01; status: available; <span title="Codes: {http://terminology.hl7.org/CodeSystem/v2-0487 TISS}">Tissue</span></a></p><p><b>result</b>: </p><ul><li><a href="DiagnosticReport-mCODECancerGenomicsReportExample01.html">Generated Summary: id: mCODECancerGeneticVariantExample01; <span title="Codes: {http://terminology.hl7.org/CodeSystem/observation-category laboratory}">Laboratory</span>; <span title="Codes: {http://loinc.org 69548-6}">Genetic variant assessment</span>; effective: Apr 1, 2019 12:00:00 AM; <span title="Codes: {http://loinc.org LA9633-4}">Present</span>; <span title="Codes: {http://loinc.org LA26398-0}">Sequencing</span></a></li><li><a href="DiagnosticReport-mCODECancerGenomicsReportExample01.html">Generated Summary: id: mCODEGenomicRegionStudiedExample01; <span title="Codes: {http://terminology.hl7.org/CodeSystem/observation-category laboratory}">Laboratory</span>; <span title="Codes: {http://loinc.org 53041-0}">DNA region of interest panel</span>; effective: Apr 1, 2019 12:00:00 AM; issued: Apr 1, 2019 12:45:33 AM</a></li></ul></div>
  </text>
  <status value="final"/>
  <category>
    <coding>
      <system value="http://terminology.hl7.org/CodeSystem/v2-0074"/>
      <code value="LAB"/>
    </coding>
  </category>
  <category>
    <coding>
      <system value="http://terminology.hl7.org/CodeSystem/v2-0074"/>
      <code value="GE"/>
    </coding>
  </category>
  <code>
    <coding>
      <system value="http://loinc.org"/>
      <code value="81247-9"/>
    </coding>
  </code>
  <subject>
    <reference value="Patient/mCODEPatientExample01"/>
  </subject>
  <effectiveDateTime value="2019-04-01"/>
  <issued value="2019-04-01T11:45:33+11:00"/>
  <specimen>
    <reference value="Specimen/mCODEGeneticSpecimenExample01"/>
  </specimen>
  <result>
    <reference value="Observation/mCODECancerGeneticVariantExample01"/>
  </result>
  <result>
    <reference value="Observation/mCODEGenomicRegionStudiedExample01"/>
  </result>
</DiagnosticReport>