This page is part of the HL7 FHIR Implementation Guide: minimal Common Oncology Data Elements (mCODE) Release 1 - US Realm | STU1 (v4.0.0-ballot: STU4 Ballot 1) based on FHIR (HL7® FHIR® Standard) R4. The current version which supersedes this version is 3.0.0. For a full list of available versions, see the Directory of published versions
Generated Narrative: Observation
Resource Observation "genomic-variant-somatic-single-nucleotide"
Profile: Genomic Variant Profile
status: final
category: Laboratory (Observation Category Codes#laboratory)
code: Genetic var assess (LOINC#69548-6)
subject: Patient/cancer-patient-john-anyperson " ANYPERSON"
effective: 2019-04-01
performer: Practitioner/us-core-practitioner-owen-oncologist " ONCOLOGIST"
value: Present (LOINC#LA9633-4)
interpretation: Positive (qualifier value) (SNOMED CT#10828004)
method: Sequencing (LOINC#LA26398-0)
component
code: Gene studied ID (LOINC#48018-6)
value: STK11 (HUGO Gene Nomenclature Committee Genes#HGNC:11389)
component
code: Simple var ID (LOINC#81252-9)
value: NM_000455.5(STK11):c.725G>A (p.Gly242Glu) (ClinVar Variant ID#611264)
component
code: Struct var HGVS name (LOINC#81290-9)
value: NM_000455.5:c.725G>A (Human Genome Variation Society nomenclature#NM_000455.5:c.725G>A)
component
code: Genomic source class (LOINC#48002-0)
value: Somatic (LOINC#LA6684-0)