minimal Common Oncology Data Elements (mCODE) Implementation Guide
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This page is part of the HL7 FHIR Implementation Guide: minimal Common Oncology Data Elements (mCODE) Release 1 - US Realm | STU1 (v4.0.0-ballot: STU4 Ballot 1) based on FHIR (HL7® FHIR® Standard) R4. The current version which supersedes this version is 3.0.0. For a full list of available versions, see the Directory of published versions

: genomics-report-john-anyperson - TTL Representation

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix loinc: <https://loinc.org/rdf/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:DiagnosticReport ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "genomics-report-john-anyperson"] ; # 
  fhir:meta [
    ( fhir:profile [
fhir:v "http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-genomics-report"^^xsd:anyURI ;
fhir:link <http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-genomics-report>     ] )
  ] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><h2><span title=\"Codes: {http://loinc.org 51969-4}\">Genetic analysis report</span> (<span title=\"Codes: {http://terminology.hl7.org/CodeSystem/v2-0074 GE}\">Genetics</span>) </h2><table class=\"grid\"><tr><td>Subject</td><td><b>John B. Anyperson </b> male, DoB: 1951-01-20 ( Medical Record Number/m123 (use: usual))</td></tr><tr><td>When For</td><td>2019-04-01</td></tr><tr><td>Reported</td><td>2019-04-01 11:45:33+1100</td></tr></table><p><b>Report Details</b></p><table class=\"grid\"><tr><td><b>Code</b></td><td><b>Value</b></td><td><b>Flags</b></td><td><b>When For</b></td><td><b>Reported</b></td></tr><tr><td><a href=\"Observation-genomic-variant-somatic-single-nucleotide.html\"><span title=\"Codes: {http://loinc.org 69548-6}\">Genetic var assess</span></a></td><td><span title=\"Codes: {http://loinc.org LA9633-4}\">Present</span></td><td><span title=\"Codes: {http://snomed.info/sct 10828004}\">Positive (qualifier value)</span></td><td>2019-04-01</td><td/></tr><tr><td><a href=\"Observation-genomic-region-studied-stk11.html\"><span title=\"Codes: {http://loinc.org 53041-0}\">DNA region of interest Pnl</span></a></td><td/><td/><td>2019-04-01</td><td/></tr></table></div>"
  ] ; # 
  fhir:status [ fhir:v "final"] ; # 
  fhir:category ( [
    ( fhir:coding [
fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/v2-0074"^^xsd:anyURI ] ;
fhir:code [ fhir:v "GE" ]     ] )
  ] ) ; # 
  fhir:code [
    ( fhir:coding [
a loinc:51969-4 ;
fhir:system [ fhir:v "http://loinc.org"^^xsd:anyURI ] ;
fhir:code [ fhir:v "51969-4" ] ;
fhir:display [ fhir:v "Genetic analysis report" ]     ] )
  ] ; # 
  fhir:subject [
fhir:reference [ fhir:v "Patient/cancer-patient-john-anyperson" ]
  ] ; # 
  fhir:effective [ fhir:v "2019-04-01"^^xsd:date] ; # 
  fhir:issued [ fhir:v "2019-04-01T11:45:33+11:00"^^xsd:dateTime] ; # 
  fhir:specimen ( [
fhir:reference [ fhir:v "Specimen/human-specimen-lung" ]
  ] ) ; # 
  fhir:result ( [
fhir:reference [ fhir:v "Observation/genomic-variant-somatic-single-nucleotide" ]
  ] [
fhir:reference [ fhir:v "Observation/genomic-region-studied-stk11" ]
  ] ) . #