minimal Common Oncology Data Elements (mCODE) Implementation Guide
1.16.0 - STU Release 2 (Ballot Version)

This page is part of the HL7 FHIR Implementation Guide: minimal Common Oncology Data Elements (mCODE) Release 1 - US Realm | STU1 (v1.16.0: STU 2 Ballot 1) based on FHIR R4. The current version which supercedes this version is 2.0.0. For a full list of available versions, see the Directory of published versions

: tumor-marker-test-oncotype-dx-jenny-m - TTL Representation

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:Observation;
  fhir:nodeRole fhir:treeRoot;
  fhir:Resource.id [ fhir:value "tumor-marker-test-oncotype-dx-jenny-m"];
  fhir:Resource.meta [
     fhir:Meta.profile [
       fhir:value "http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-tumor-marker-test";
       fhir:index 0;
       fhir:link <http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-tumor-marker-test>     ]
  ];
  fhir:DomainResource.text [
     fhir:Narrative.status [ fhir:value "generated" ];
     fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative</b></p><p></p><p><b>category</b>: <span title=\"Codes: {http://terminology.hl7.org/CodeSystem/observation-category laboratory}\">Laboratory</span></p><p><b>code</b>: <span title=\"Codes: {http://hl7.org/fhir/us/mcode/CodeSystem/mcode-catch-code-cs TMT-OTHER}, {http://www.ncbi.nlm.nih.gov/gtr 509910}\">Oncotype DX Breast Recurrence Score Assay</span></p><p><b>subject</b>: <a href=\"Patient-cancer-patient-jenny-m.html\">Generated Summary: Medical Record Number: MRN1234 (USUAL); Jenny M ; gender: female; birthDate: 1965-01-01</a></p><p><b>effective</b>: 2018-04-12</p><p><b>performer</b>: <a href=\"Organization-us-core-organization-bedrock-medicine.html\">Generated Summary: id: 1265710000; active; name: Bedrock Medicine</a></p><p><b>value</b>: 47 Recurrence score</p><p><b>interpretation</b>: <span title=\"Codes: {http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation H}\">High</span></p></div>"
  ];
  fhir:Observation.status [ fhir:value "final"];
  fhir:Observation.category [
     fhir:index 0;
     fhir:CodeableConcept.coding [
       fhir:index 0;
       fhir:Coding.system [ fhir:value "http://terminology.hl7.org/CodeSystem/observation-category" ];
       fhir:Coding.code [ fhir:value "laboratory" ]     ]
  ];
  fhir:Observation.code [
     fhir:CodeableConcept.coding [
       fhir:index 0;
       fhir:Coding.system [ fhir:value "http://hl7.org/fhir/us/mcode/CodeSystem/mcode-catch-code-cs" ];
       fhir:Coding.code [ fhir:value "TMT-OTHER" ];
       fhir:Coding.display [ fhir:value "Other Tumor Marker Test, Specify" ]     ], [
       fhir:index 1;
       fhir:Coding.system [ fhir:value "http://www.ncbi.nlm.nih.gov/gtr" ];
       fhir:Coding.code [ fhir:value "509910" ];
       fhir:Coding.display [ fhir:value "Oncotype DX Breast Recurrence Score Assay" ]     ];
     fhir:CodeableConcept.text [ fhir:value "Oncotype DX Breast Recurrence Score Assay" ]
  ];
  fhir:Observation.subject [
     fhir:Reference.reference [ fhir:value "Patient/cancer-patient-jenny-m" ]
  ];
  fhir:Observation.effectiveDateTime [ fhir:value "2018-04-12"^^xsd:date];
  fhir:Observation.performer [
     fhir:index 0;
     fhir:Reference.reference [ fhir:value "Organization/us-core-organization-bedrock-medicine" ]
  ];
  fhir:Observation.valueQuantity [
     fhir:Quantity.value [ fhir:value "47"^^xsd:decimal ];
     fhir:Quantity.unit [ fhir:value "Recurrence score" ];
     fhir:Quantity.system [ fhir:value "http://unitsofmeasure.org" ];
     fhir:Quantity.code [ fhir:value "{ScoreOf}" ]
  ];
  fhir:Observation.interpretation [
     fhir:index 0;
     fhir:CodeableConcept.coding [
       fhir:index 0;
       fhir:Coding.system [ fhir:value "http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation" ];
       fhir:Coding.code [ fhir:value "H" ];
       fhir:Coding.display [ fhir:value "High" ]     ]
  ].

# - ontology header ------------------------------------------------------------

 a owl:Ontology;
  owl:imports fhir:fhir.ttl.