This page is part of the Logica COVID-19 FHIR Profile Library IG (v1.0.0: Informative - Informative) based on FHIR R4. This is the current published version. For a full list of available versions, see the Directory of published versions

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: SARScoronavirus2sequencingidentificationpanelPtXXXMolgenExample - XML Representation

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<Observation xmlns="http://hl7.org/fhir">
  <id value="SARScoronavirus2sequencingidentificationpanelPtXXXMolgenExample"/>
  <meta>
    <profile
             value="http://hl7.org/fhir/us/covid19library/StructureDefinition/SARScoronavirus2sequencingidentificationpanelPtXXXMolgen"/>
  </meta>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative</b></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource "SARScoronavirus2sequencingidentificationpanelPtXXXMolgenExample" </p><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-SARScoronavirus2sequencingidentificationpanelPtXXXMolgen.html">SARS-CoV-2 (COVID-19) sequencing and identification panel - Specimen by Molecular genetics method</a></p></div><p><b>status</b>: final</p><p><b>category</b>: Laboratory <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="http://terminology.hl7.org/3.1.0/CodeSystem-observation-category.html">Observation Category Codes</a>#laboratory)</span></p><p><b>code</b>: SARS-CoV-2 (COVID-19) sequencing and identification panel - Specimen by Molecular genetics method <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#96894-1)</span></p><p><b>subject</b>: <a href="Patient-patient-anyperson-mary.html">Patient/patient-anyperson-mary</a> " ANYPERSON"</p><p><b>effective</b>: 2021-09-21</p><p><b>dataAbsentReason</b>: Not Permitted <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="http://terminology.hl7.org/3.1.0/CodeSystem-data-absent-reason.html">DataAbsentReason</a>#not-permitted)</span></p><p><b>hasMember</b>: </p><ul><li><a href="Observation-SequencingStudyIdentifierExample.html">Observation/SequencingStudyIdentifierExample</a></li><li><a href="Observation-GISAIDSequenceAccessionNumberExample.html">Observation/GISAIDSequenceAccessionNumberExample</a></li><li><a href="Observation-SARSCoV2wholegenomeSeqPtIsolateNomSequencingExample.html">Observation/SARSCoV2wholegenomeSeqPtIsolateNomSequencingExample</a></li><li><a href="Observation-SARScoronavirus2SgenemutationdetectedPridPtXXXNomMolgenExample.html">Observation/SARScoronavirus2SgenemutationdetectedPridPtXXXNomMolgenExample</a></li><li><a href="Observation-SARScoronavirus2SgenemutationPrThrPtXXXOrdMolgenExample.html">Observation/SARScoronavirus2SgenemutationPrThrPtXXXOrdMolgenExample</a></li><li><a href="Observation-SARScoronavirus2lineagePridPtXXXNomMolgenExample.html">Observation/SARScoronavirus2lineagePridPtXXXNomMolgenExample</a></li><li><a href="Observation-SARScoronavirus2cladeTypePtXXXNomMolgenExample.html">Observation/SARScoronavirus2cladeTypePtXXXNomMolgenExample</a></li><li><a href="Observation-SARScoronavirus2variantTypePtXXXNomSequencingExample.html">Observation/SARScoronavirus2variantTypePtXXXNomSequencingExample</a></li><li><a href="Observation-SARScoronavirus2variantinterpretationImpPtXXXNarExample.html">Observation/SARScoronavirus2variantinterpretationImpPtXXXNarExample</a></li></ul></div>
  </text>
  <status value="final"/>
  <category>
    <coding>
      <system value="http://terminology.hl7.org/CodeSystem/observation-category"/>
      <code value="laboratory"/>
    </coding>
  </category>
  <code>
    <coding>
      <system value="http://loinc.org"/>
      <code value="96894-1"/>
    </coding>
  </code>
  <subject>
    <reference value="Patient/patient-anyperson-mary"/>
  </subject>
  <effectiveDateTime value="2021-09-21"/>
  <dataAbsentReason>
    <coding>
      <system value="http://terminology.hl7.org/CodeSystem/data-absent-reason"/>
      <code value="not-permitted"/>
    </coding>
  </dataAbsentReason>
  <hasMember>
    <reference value="Observation/SequencingStudyIdentifierExample"/>
  </hasMember>
  <hasMember>
    <reference value="Observation/GISAIDSequenceAccessionNumberExample"/>
  </hasMember>
  <hasMember>
    <reference
               value="Observation/SARSCoV2wholegenomeSeqPtIsolateNomSequencingExample"/>
  </hasMember>
  <hasMember>
    <reference
               value="Observation/SARScoronavirus2SgenemutationdetectedPridPtXXXNomMolgenExample"/>
  </hasMember>
  <hasMember>
    <reference
               value="Observation/SARScoronavirus2SgenemutationPrThrPtXXXOrdMolgenExample"/>
  </hasMember>
  <hasMember>
    <reference
               value="Observation/SARScoronavirus2lineagePridPtXXXNomMolgenExample"/>
  </hasMember>
  <hasMember>
    <reference
               value="Observation/SARScoronavirus2cladeTypePtXXXNomMolgenExample"/>
  </hasMember>
  <hasMember>
    <reference
               value="Observation/SARScoronavirus2variantTypePtXXXNomSequencingExample"/>
  </hasMember>
  <hasMember>
    <reference
               value="Observation/SARScoronavirus2variantinterpretationImpPtXXXNarExample"/>
  </hasMember>
</Observation>