COVID-19 FHIR Profile Library IG
0.14.0 - Informative Ballot

This page is part of the Logica COVID-19 FHIR Profile Library IG (v0.14.0: Drafts Ballot 2) based on FHIR R4. The current version which supercedes this version is 1.0.0. For a full list of available versions, see the Directory of published versions

: SARScoronavirus2RNApanelPtSalivaProbeamptarExample - TTL Representation

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix loinc: <http://loinc.org/rdf#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:Observation;
  fhir:nodeRole fhir:treeRoot;
  fhir:Resource.id [ fhir:value "SARScoronavirus2RNApanelPtSalivaProbeamptarExample"];
  fhir:Resource.meta [
     fhir:Meta.profile [
       fhir:value "http://hl7.org/fhir/us/covid19library/StructureDefinition/SARScoronavirus2RNApanelPtSalivaProbeamptar";
       fhir:index 0;
       fhir:link <http://hl7.org/fhir/us/covid19library/StructureDefinition/SARScoronavirus2RNApanelPtSalivaProbeamptar>     ]
  ];
  fhir:DomainResource.text [
     fhir:Narrative.status [ fhir:value "generated" ];
     fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative</b></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource \"SARScoronavirus2RNApanelPtSalivaProbeamptarExample\" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-SARScoronavirus2RNApanelPtSalivaProbeamptar.html\">SARS-CoV-2 (COVID-19) RNA panel - Saliva (oral fluid) by NAA with probe detection</a></p></div><p><b>status</b>: final</p><p><b>category</b>: Laboratory <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/3.0.0/CodeSystem-observation-category.html\">Observation Category Codes</a>#laboratory)</span></p><p><b>code</b>: SARS-CoV-2 (COVID-19) RNA panel - Saliva (oral fluid) by NAA with probe detection <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#95826-4)</span></p><p><b>subject</b>: <a href=\"Patient-patient-anyperson-mary.html\">Patient/patient-anyperson-mary</a> \" ANYPERSON\"</p><p><b>effective</b>: 2021-09-21</p><p><b>dataAbsentReason</b>: Not Permitted <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/3.0.0/CodeSystem-data-absent-reason.html\">DataAbsentReason</a>#not-permitted)</span></p><p><b>hasMember</b>: </p><ul><li><a href=\"Observation-SARScoronavirus2NGenePrThrPtSalivaOrdProbeamptarExample.html\">Observation/SARScoronavirus2NGenePrThrPtSalivaOrdProbeamptarExample</a></li><li><a href=\"Observation-SARSCoV2NgenePrThrPtSalivaOrdPATCDCN1Example.html\">Observation/SARSCoV2NgenePrThrPtSalivaOrdPATCDCN1Example</a></li><li><a href=\"Observation-SARScoronavirus2ORF1abregionPrThrPtSalivaOrdProbeamptarExample.html\">Observation/SARScoronavirus2ORF1abregionPrThrPtSalivaOrdProbeamptarExample</a></li><li><a href=\"Observation-SARScoronavirus2RdRpgenePrThrPtSalivaOrdProbeamptarExample.html\">Observation/SARScoronavirus2RdRpgenePrThrPtSalivaOrdProbeamptarExample</a></li><li><a href=\"Observation-SARSCoV2RNAPrThrPtSalivaOrdProbAmpTarExample.html\">Observation/SARSCoV2RNAPrThrPtSalivaOrdProbAmpTarExample</a></li><li><a href=\"Observation-SARSrelatedcoronavirusEgenePrThrPtSalivaOrdProbeamptarExample.html\">Observation/SARSrelatedcoronavirusEgenePrThrPtSalivaOrdProbeamptarExample</a></li></ul></div>"
  ];
  fhir:Observation.status [ fhir:value "final"];
  fhir:Observation.category [
     fhir:index 0;
     fhir:CodeableConcept.coding [
       fhir:index 0;
       fhir:Coding.system [ fhir:value "http://terminology.hl7.org/CodeSystem/observation-category" ];
       fhir:Coding.code [ fhir:value "laboratory" ]     ]
  ];
  fhir:Observation.code [
     fhir:CodeableConcept.coding [
       fhir:index 0;
       a loinc:95826-4;
       fhir:Coding.system [ fhir:value "http://loinc.org" ];
       fhir:Coding.code [ fhir:value "95826-4" ];
       fhir:Coding.display [ fhir:value "SARS-CoV-2 (COVID-19) RNA panel - Saliva (oral fluid) by NAA with probe detection" ]     ]
  ];
  fhir:Observation.subject [
     fhir:Reference.reference [ fhir:value "Patient/patient-anyperson-mary" ]
  ];
  fhir:Observation.effectiveDateTime [ fhir:value "2021-09-21"^^xsd:date];
  fhir:Observation.dataAbsentReason [
     fhir:CodeableConcept.coding [
       fhir:index 0;
       fhir:Coding.system [ fhir:value "http://terminology.hl7.org/CodeSystem/data-absent-reason" ];
       fhir:Coding.code [ fhir:value "not-permitted" ]     ]
  ];
  fhir:Observation.hasMember [
     fhir:index 0;
     fhir:Reference.reference [ fhir:value "Observation/SARScoronavirus2NGenePrThrPtSalivaOrdProbeamptarExample" ]
  ], [
     fhir:index 1;
     fhir:Reference.reference [ fhir:value "Observation/SARSCoV2NgenePrThrPtSalivaOrdPATCDCN1Example" ]
  ], [
     fhir:index 2;
     fhir:Reference.reference [ fhir:value "Observation/SARScoronavirus2ORF1abregionPrThrPtSalivaOrdProbeamptarExample" ]
  ], [
     fhir:index 3;
     fhir:Reference.reference [ fhir:value "Observation/SARScoronavirus2RdRpgenePrThrPtSalivaOrdProbeamptarExample" ]
  ], [
     fhir:index 4;
     fhir:Reference.reference [ fhir:value "Observation/SARSCoV2RNAPrThrPtSalivaOrdProbAmpTarExample" ]
  ], [
     fhir:index 5;
     fhir:Reference.reference [ fhir:value "Observation/SARSrelatedcoronavirusEgenePrThrPtSalivaOrdProbeamptarExample" ]
  ].

# - ontology header ------------------------------------------------------------

 a owl:Ontology;
  owl:imports fhir:fhir.ttl.