FHIR Extensions Pack
5.1.0 - 5.1.0 (April 2024) International flag

This page is part of the FHIR Core Extensions Registry (v5.1.0: Release 5.1) based on FHIR (HL7® FHIR® Standard) v5.0.0. This is the current published version. For a full list of available versions, see the Directory of published versions

: FML Conversion for SpecimenDefinition: R4B to R5 - JSON Representation

Page standards status: Trial-use Maturity Level: 1

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{
  "resourceType" : "StructureMap",
  "id" : "SpecimenDefinition4Bto5",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><pre class=\"fml\">\r\n<span style=\"color: #cc00cc\">/// <b>url</b> = </span><span style=\"color: blue\">'http://hl7.org/fhir/StructureMap/SpecimenDefinition4Bto5'</span>\r\n<span style=\"color: #cc00cc\">/// <b>name</b> = </span><span style=\"color: blue\">'SpecimenDefinition4Bto5'</span>\r\n<span style=\"color: #cc00cc\">/// <b>title</b> = </span><span style=\"color: blue\">'FML Conversion for SpecimenDefinition: R4B to R5'</span>\r\n<span style=\"color: #cc00cc\">/// <b>status</b> = </span><span style=\"color: blue\">'active'</span>\r\n\r\n<b>conceptmap</b><span style=\"color: navy\"> &quot;</span>PublicationStatus<span style=\"color: navy\">&quot; {\r\n</span><b>  prefix </b>s<span style=\"color: navy\"> = &quot;</span><a href=\"http://hl7.org/fhir/R4B/codesystem-publication-status.html\" title=\"PublicationStatus\">http://hl7.org/fhir/4.3/publication-status</a><span style=\"color: navy\">&quot;\r\n</span><b>  prefix </b>t<span style=\"color: navy\"> = &quot;</span><a href=\"http://hl7.org/fhir/R5/codesystem-publication-status.html\" title=\"PublicationStatus\">http://hl7.org/fhir/publication-status</a><span style=\"color: navy\">&quot;\r\n</span>\r\n  s<span style=\"color: navy\">:</span>draft <b>-</b> t<span style=\"color: navy\">:</span>draft\r\n  s<span style=\"color: navy\">:</span>active <b>-</b> t<span style=\"color: navy\">:</span>active\r\n  s<span style=\"color: navy\">:</span>retired <b>-</b> t<span style=\"color: navy\">:</span>retired\r\n  s<span style=\"color: navy\">:</span>unknown <b>-</b> t<span style=\"color: navy\">:</span>unknown\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>conceptmap</b><span style=\"color: navy\"> &quot;</span>SpecimenContainedPreference<span style=\"color: navy\">&quot; {\r\n</span><b>  prefix </b>s<span style=\"color: navy\"> = &quot;</span><a href=\"http://hl7.org/fhir/R4B/codesystem-specimen-contained-preference.html\" title=\"SpecimenContainedPreference\">http://hl7.org/fhir/4.3/specimen-contained-preference</a><span style=\"color: navy\">&quot;\r\n</span><b>  prefix </b>t<span style=\"color: navy\"> = &quot;</span><a href=\"http://hl7.org/fhir/R5/codesystem-specimen-contained-preference.html\" title=\"Specimen Contained Preference\">http://hl7.org/fhir/specimen-contained-preference</a><span style=\"color: navy\">&quot;\r\n</span>\r\n  s<span style=\"color: navy\">:</span>preferred <b>-</b> t<span style=\"color: navy\">:</span>preferred\r\n  s<span style=\"color: navy\">:</span>alternate <b>-</b> t<span style=\"color: navy\">:</span>alternate\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>uses</b><span style=\"color: navy\"> &quot;</span><a href=\"http://hl7.org/fhir/R4B/specimendefinition.html\" title=\"SpecimenDefinition\">http://hl7.org/fhir/4.3/StructureDefinition/SpecimenDefinition</a><span style=\"color: navy\">&quot; </span><b>alias </b>SpecimenDefinitionR4B <b>as </b><b>source</b>\r\n<b>uses</b><span style=\"color: navy\"> &quot;</span><a href=\"http://hl7.org/fhir/R5/specimendefinition.html\" title=\"SpecimenDefinition\">http://hl7.org/fhir/StructureDefinition/SpecimenDefinition</a><span style=\"color: navy\">&quot; </span><b>alias </b>SpecimenDefinitionR5 <b>as </b><b>target</b>\r\n\r\n<b>imports</b><span style=\"color: navy\"> &quot;</span>http://hl7.org/fhir/StructureMap/*4Bto5<span style=\"color: navy\">&quot;\r\n</span>\r\n<b>group </b>SpecimenDefinition<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">src</span><span style=\"color: navy\"> : </span>SpecimenDefinitionR4B, <b>target</b> <span style=\"color: maroon\">tgt</span><span style=\"color: navy\"> : </span>SpecimenDefinitionR5<span style=\"color: navy\">)</span><b> extends </b>DomainResource<b> &lt;&lt;type+&gt;&gt;</b><span style=\"color: navy\"> {\r\n</span>  src.identifier<span style=\"color: navy\"><b> -&gt; </b></span>tgt.identifier<span style=\"color: navy\">;</span> <span style=\"color: navy\">// </span><span style=\"color: green\">src.url -&gt; tgt.url;</span>\r\n  src.typeCollected<span style=\"color: navy\"><b> -&gt; </b></span>tgt.typeCollected<span style=\"color: navy\">;</span> <span style=\"color: navy\">// </span><span style=\"color: green\">src.version -&gt; tgt.version;</span>\r\n  src.patientPreparation<span style=\"color: navy\"><b> -&gt; </b></span>tgt.patientPreparation<span style=\"color: navy\">;</span>\r\n  src.timeAspect<span style=\"color: navy\"><b> -&gt; </b></span>tgt.timeAspect<span style=\"color: navy\">;</span>\r\n  src.collection<span style=\"color: navy\"><b> -&gt; </b></span>tgt.collection<span style=\"color: navy\">;</span>\r\n  src.typeTested<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -&gt; </b></span>tgt.typeTested<b> as </b><span style=\"color: maroon\">t</span><b> then </b>SpecimenDefinitionTypeTested<span style=\"color: navy\">(</span><span style=\"color: maroon\">s</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">t</span><span style=\"color: navy\">)</span><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>SpecimenDefinitionTypeTested<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">src</span>, <b>target</b> <span style=\"color: maroon\">tgt</span><span style=\"color: navy\">)</span><b> extends </b>BackboneElement<span style=\"color: navy\"> {\r\n</span>  src.isDerived<span style=\"color: navy\"><b> -&gt; </b></span>tgt.isDerived<span style=\"color: navy\">;</span>\r\n  src.type<span style=\"color: navy\"><b> -&gt; </b></span>tgt.type<span style=\"color: navy\">;</span>\r\n  src.preference<b> as </b><span style=\"color: maroon\">v</span><span style=\"color: navy\"><b> -&gt; </b></span>tgt.preference = <b>translate</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">v</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'#SpecimenContainedPreference'</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'code'</span><span style=\"color: navy\">)</span><span style=\"color: navy\">;</span>\r\n  src.container<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -&gt; </b></span>tgt.container<b> as </b><span style=\"color: maroon\">t</span><b> then </b>SpecimenDefinitionTypeTestedContainer<span style=\"color: navy\">(</span><span style=\"color: maroon\">s</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">t</span><span style=\"color: navy\">)</span><span style=\"color: navy\">;</span>\r\n  src.requirement<span style=\"color: navy\"><b> -&gt; </b></span>tgt.requirement<span style=\"color: navy\">;</span>\r\n  src.retentionTime<span style=\"color: navy\"><b> -&gt; </b></span>tgt.retentionTime<span style=\"color: navy\">;</span>\r\n  src.rejectionCriterion<span style=\"color: navy\"><b> -&gt; </b></span>tgt.rejectionCriterion<span style=\"color: navy\">;</span> <span style=\"color: navy\">// </span><span style=\"color: green\">src.singleUse -&gt; tgt.singleUse;</span>\r\n  src.handling<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -&gt; </b></span>tgt.handling<b> as </b><span style=\"color: maroon\">t</span><b> then </b>SpecimenDefinitionTypeTestedHandling<span style=\"color: navy\">(</span><span style=\"color: maroon\">s</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">t</span><span style=\"color: navy\">)</span><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>SpecimenDefinitionTypeTestedContainer<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">src</span>, <b>target</b> <span style=\"color: maroon\">tgt</span><span style=\"color: navy\">)</span><b> extends </b>BackboneElement<span style=\"color: navy\"> {\r\n</span>  src.material<span style=\"color: navy\"><b> -&gt; </b></span>tgt.material<span style=\"color: navy\">;</span>\r\n  src.type<span style=\"color: navy\"><b> -&gt; </b></span>tgt.type<span style=\"color: navy\">;</span>\r\n  src.cap<span style=\"color: navy\"><b> -&gt; </b></span>tgt.cap<span style=\"color: navy\">;</span>\r\n  src.description<span style=\"color: navy\"><b> -&gt; </b></span>tgt.description<span style=\"color: navy\">;</span>\r\n  src.capacity<span style=\"color: navy\"><b> -&gt; </b></span>tgt.capacity<span style=\"color: navy\">;</span>\r\n  src.minimumVolume<span style=\"color: navy\"> : </span>Quantity<span style=\"color: navy\"><b> -&gt; </b></span>tgt.minimumVolume<span style=\"color: navy\">;</span>\r\n  src.minimumVolume<span style=\"color: navy\"> : </span>string<span style=\"color: navy\"><b> -&gt; </b></span>tgt.minimumVolume<span style=\"color: navy\">;</span>\r\n  src.additive<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -&gt; </b></span>tgt.additive<b> as </b><span style=\"color: maroon\">t</span><b> then </b>SpecimenDefinitionTypeTestedContainerAdditive<span style=\"color: navy\">(</span><span style=\"color: maroon\">s</span><span style=\"color: navy\">, </span><span style=\"color: maroon\">t</span><span style=\"color: navy\">)</span><span style=\"color: navy\">;</span>\r\n  src.preparation<span style=\"color: navy\"><b> -&gt; </b></span>tgt.preparation<span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>SpecimenDefinitionTypeTestedContainerAdditive<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">src</span>, <b>target</b> <span style=\"color: maroon\">tgt</span><span style=\"color: navy\">)</span><b> extends </b>BackboneElement<span style=\"color: navy\"> {\r\n</span>  src.additive<span style=\"color: navy\"> : </span>CodeableConcept<span style=\"color: navy\"><b> -&gt; </b></span>tgt.additive<span style=\"color: navy\">;</span>\r\n  src.additive<span style=\"color: navy\"> : </span>Reference<span style=\"color: navy\"><b> -&gt; </b></span>tgt.additive<span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span><b>group </b>SpecimenDefinitionTypeTestedHandling<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">src</span>, <b>target</b> <span style=\"color: maroon\">tgt</span><span style=\"color: navy\">)</span><b> extends </b>BackboneElement<span style=\"color: navy\"> {\r\n</span>  src.temperatureQualifier<span style=\"color: navy\"><b> -&gt; </b></span>tgt.temperatureQualifier<span style=\"color: navy\">;</span>\r\n  src.temperatureRange<span style=\"color: navy\"><b> -&gt; </b></span>tgt.temperatureRange<span style=\"color: navy\">;</span>\r\n  src.maxDuration<span style=\"color: navy\"><b> -&gt; </b></span>tgt.maxDuration<span style=\"color: navy\">;</span>\r\n  src.instruction<span style=\"color: navy\"><b> -&gt; </b></span>tgt.instruction<span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span></pre></div>"
  },
  "contained" : [
    {
      "resourceType" : "ConceptMap",
      "id" : "PublicationStatus",
      "status" : "active",
      "group" : [
        {
          "source" : "http://hl7.org/fhir/4.3/publication-status",
          "target" : "http://hl7.org/fhir/publication-status",
          "element" : [
            {
              "code" : "draft",
              "target" : [
                {
                  "code" : "draft",
                  "relationship" : "related-to"
                }
              ]
            },
            {
              "code" : "active",
              "target" : [
                {
                  "code" : "active",
                  "relationship" : "related-to"
                }
              ]
            },
            {
              "code" : "retired",
              "target" : [
                {
                  "code" : "retired",
                  "relationship" : "related-to"
                }
              ]
            },
            {
              "code" : "unknown",
              "target" : [
                {
                  "code" : "unknown",
                  "relationship" : "related-to"
                }
              ]
            }
          ]
        }
      ]
    },
    {
      "resourceType" : "ConceptMap",
      "id" : "SpecimenContainedPreference",
      "status" : "active",
      "group" : [
        {
          "source" : "http://hl7.org/fhir/4.3/specimen-contained-preference",
          "target" : "http://hl7.org/fhir/specimen-contained-preference",
          "element" : [
            {
              "code" : "preferred",
              "target" : [
                {
                  "code" : "preferred",
                  "relationship" : "related-to"
                }
              ]
            },
            {
              "code" : "alternate",
              "target" : [
                {
                  "code" : "alternate",
                  "relationship" : "related-to"
                }
              ]
            }
          ]
        }
      ]
    }
  ],
  "extension" : [
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg",
      "valueCode" : "fhir"
    },
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm",
      "valueInteger" : 1,
      "_valueInteger" : {
        "extension" : [
          {
            "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
            "valueCanonical" : "http://hl7.org/fhir/extensions/ImplementationGuide/hl7.fhir.uv.extensions"
          }
        ]
      }
    },
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
      "valueCode" : "trial-use",
      "_valueCode" : {
        "extension" : [
          {
            "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
            "valueCanonical" : "http://hl7.org/fhir/extensions/ImplementationGuide/hl7.fhir.uv.extensions"
          }
        ]
      }
    }
  ],
  "url" : "http://hl7.org/fhir/StructureMap/SpecimenDefinition4Bto5",
  "version" : "5.1.0",
  "name" : "SpecimenDefinition4Bto5",
  "title" : "FML Conversion for SpecimenDefinition: R4B to R5",
  "status" : "active",
  "date" : "2024-04-27T18:54:50+10:00",
  "publisher" : "HL7 International / FHIR Infrastructure",
  "contact" : [
    {
      "telecom" : [
        {
          "system" : "url",
          "value" : "http://www.hl7.org/Special/committees/fiwg"
        }
      ]
    }
  ],
  "description" : "FMLConversionforSpecimenDefinitionR4BtoR5",
  "jurisdiction" : [
    {
      "coding" : [
        {
          "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
          "code" : "001"
        }
      ]
    }
  ],
  "structure" : [
    {
      "url" : "http://hl7.org/fhir/4.3/StructureDefinition/SpecimenDefinition",
      "mode" : "source",
      "alias" : "SpecimenDefinitionR4B"
    },
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/SpecimenDefinition",
      "mode" : "target",
      "alias" : "SpecimenDefinitionR5"
    }
  ],
  "import" : [
    "http://hl7.org/fhir/StructureMap/*4Bto5"
  ],
  "group" : [
    {
      "name" : "SpecimenDefinition",
      "extends" : "DomainResource",
      "typeMode" : "type-and-types",
      "input" : [
        {
          "name" : "src",
          "type" : "SpecimenDefinitionR4B",
          "mode" : "source"
        },
        {
          "name" : "tgt",
          "type" : "SpecimenDefinitionR5",
          "mode" : "target"
        }
      ],
      "rule" : [
        {
          "name" : "identifier",
          "source" : [
            {
              "context" : "src",
              "element" : "identifier",
              "variable" : "vvv"
            }
          ],
          "target" : [
            {
              "context" : "tgt",
              "element" : "identifier",
              "variable" : "vvv",
              "transform" : "create"
            }
          ],
          "dependent" : [
            {
              "name" : "DefaultMappingGroupAnonymousAlias",
              "parameter" : [
                {
                  "valueId" : "vvv"
                },
                {
                  "valueId" : "vvv"
                }
              ]
            }
          ],
          "documentation" : "src.url -> tgt.url;"
        },
        {
          "name" : "typeCollected",
          "source" : [
            {
              "context" : "src",
              "element" : "typeCollected",
              "variable" : "vvv"
            }
          ],
          "target" : [
            {
              "context" : "tgt",
              "element" : "typeCollected",
              "variable" : "vvv",
              "transform" : "create"
            }
          ],
          "dependent" : [
            {
              "name" : "DefaultMappingGroupAnonymousAlias",
              "parameter" : [
                {
                  "valueId" : "vvv"
                },
                {
                  "valueId" : "vvv"
                }
              ]
            }
          ],
          "documentation" : "src.version -> tgt.version;"
        },
        {
          "name" : "patientPreparation",
          "source" : [
            {
              "context" : "src",
              "element" : "patientPreparation",
              "variable" : "vvv"
            }
          ],
          "target" : [
            {
              "context" : "tgt",
              "element" : "patientPreparation",
              "variable" : "vvv",
              "transform" : "create"
            }
          ],
          "dependent" : [
            {
              "name" : "DefaultMappingGroupAnonymousAlias",
              "parameter" : [
                {
                  "valueId" : "vvv"
                },
                {
                  "valueId" : "vvv"
                }
              ]
            }
          ]
        },
        {
          "name" : "timeAspect",
          "source" : [
            {
              "context" : "src",
              "element" : "timeAspect",
              "variable" : "vvv"
            }
          ],
          "target" : [
            {
              "context" : "tgt",
              "element" : "timeAspect",
              "variable" : "vvv",
              "transform" : "create"
            }
          ],
          "dependent" : [
            {
              "name" : "DefaultMappingGroupAnonymousAlias",
              "parameter" : [
                {
                  "valueId" : "vvv"
                },
                {
                  "valueId" : "vvv"
                }
              ]
            }
          ]
        },
        {
          "name" : "collection",
          "source" : [
            {
              "context" : "src",
              "element" : "collection",
              "variable" : "vvv"
            }
          ],
          "target" : [
            {
              "context" : "tgt",
              "element" : "collection",
              "variable" : "vvv",
              "transform" : "create"
            }
          ],
          "dependent" : [
            {
              "name" : "DefaultMappingGroupAnonymousAlias",
              "parameter" : [
                {
                  "valueId" : "vvv"
                },
                {
                  "valueId" : "vvv"
                }
              ]
            }
          ]
        },
        {
          "name" : "typeTested",
          "source" : [
            {
              "context" : "src",
              "element" : "typeTested",
              "variable" : "s"
            }
          ],
          "target" : [
            {
              "context" : "tgt",
              "element" : "typeTested",
              "variable" : "t"
            }
          ],
          "dependent" : [
            {
              "name" : "SpecimenDefinitionTypeTested",
              "parameter" : [
                {
                  "valueId" : "s"
                },
                {
                  "valueId" : "t"
                }
              ]
            }
          ]
        }
      ]
    },
    {
      "name" : "SpecimenDefinitionTypeTested",
      "extends" : "BackboneElement",
      "input" : [
        {
          "name" : "src",
          "mode" : "source"
        },
        {
          "name" : "tgt",
          "mode" : "target"
        }
      ],
      "rule" : [
        {
          "name" : "isDerived",
          "source" : [
            {
              "context" : "src",
              "element" : "isDerived",
              "variable" : "vvv"
            }
          ],
          "target" : [
            {
              "context" : "tgt",
              "element" : "isDerived",
              "variable" : "vvv",
              "transform" : "create"
            }
          ],
          "dependent" : [
            {
              "name" : "DefaultMappingGroupAnonymousAlias",
              "parameter" : [
                {
                  "valueId" : "vvv"
                },
                {
                  "valueId" : "vvv"
                }
              ]
            }
          ]
        },
        {
          "name" : "type",
          "source" : [
            {
              "context" : "src",
              "element" : "type",
              "variable" : "vvv"
            }
          ],
          "target" : [
            {
              "context" : "tgt",
              "element" : "type",
              "variable" : "vvv",
              "transform" : "create"
            }
          ],
          "dependent" : [
            {
              "name" : "DefaultMappingGroupAnonymousAlias",
              "parameter" : [
                {
                  "valueId" : "vvv"
                },
                {
                  "valueId" : "vvv"
                }
              ]
            }
          ]
        },
        {
          "name" : "preference",
          "source" : [
            {
              "context" : "src",
              "element" : "preference",
              "variable" : "v"
            }
          ],
          "target" : [
            {
              "context" : "tgt",
              "element" : "preference",
              "transform" : "translate",
              "parameter" : [
                {
                  "valueId" : "v"
                },
                {
                  "valueString" : "#SpecimenContainedPreference"
                },
                {
                  "valueString" : "code"
                }
              ]
            }
          ]
        },
        {
          "name" : "container",
          "source" : [
            {
              "context" : "src",
              "element" : "container",
              "variable" : "s"
            }
          ],
          "target" : [
            {
              "context" : "tgt",
              "element" : "container",
              "variable" : "t"
            }
          ],
          "dependent" : [
            {
              "name" : "SpecimenDefinitionTypeTestedContainer",
              "parameter" : [
                {
                  "valueId" : "s"
                },
                {
                  "valueId" : "t"
                }
              ]
            }
          ]
        },
        {
          "name" : "requirement",
          "source" : [
            {
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