This page is part of the FHIR Specification (v3.0.2: STU 3). The current version which supercedes this version is 5.0.0. For a full list of available versions, see the Directory of published versions . Page versions: R4B R4 R3
Clinical Genomics Work Group | Maturity Level: N/A | Ballot Status: Informative | Compartments: Not linked to any defined compartments |
Sequence Graphic example-1
{ "resourceType": "Sequence", "id": "graphic-example-1", "text": { "status": "generated", "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative with Details</b></p><p><b>id</b>: graphic-example-1</p><p><b>type</b>: dna</p><p><b>coordinateSystem</b>: 0</p><h3>ReferenceSeqs</h3><table><tr><td>-</td><td><b>ReferenceSeqId</b></td><td><b>Strand</b></td><td><b>WindowStart</b></td><td><b>WindowEnd</b></td></tr><tr><td>*</td><td>NC_000002.12 <span>(Details : {http://www.ncbi.nlm.nih.gov/nuccore code 'NC_000002.12' = 'NC_000002.12)</span></td><td>1</td><td>128273724</td><td>128273732</td></tr></table><h3>Variants</h3><table><tr><td>-</td><td><b>Start</b></td><td><b>End</b></td><td><b>ObservedAllele</b></td><td><b>ReferenceAllele</b></td><td><b>Cigar</b></td></tr><tr><td>*</td><td>128273725</td><td>128273726</td><td>G</td><td>T</td><td>1M</td></tr></table><p><b>pointer</b>: <a>Sequence/graphic-example-2</a></p></div>" }, "type": "dna", "coordinateSystem": 0, "referenceSeq": { "referenceSeqId": { "coding": [ { "system": "http://www.ncbi.nlm.nih.gov/nuccore", "code": "NC_000002.12" } ] }, "strand": 1, "windowStart": 128273724, "windowEnd": 128273732 }, "variant": [ { "start": 128273725, "end": 128273726, "observedAllele": "G", "referenceAllele": "T", "cigar": "1M" } ], "pointer": [ { "reference": "Sequence/graphic-example-2" } ] }
Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.