This code system http://hl7.org/fhir/genomicstudy-methodtype defines the following codes:

CodeDisplay
biochemical-genetics Biochemical Genetics
cytogenetics Cytogenetics
molecular-genetics Molecular Genetics
analyte Analyte
chromosome-breakage-studies Chromosome breakage studies
deletion-duplication-analysis Deletion/duplication analysis
detection-of-homozygosity Detection of homozygosity
enzyme-assay Enzyme assay
fish-interphase FISH-interphase
fish-metaphase FISH-metaphase
flow-cytometry Flow cytometry
fish Fluorescence in situ hybridization (FISH)
immunohistochemistry Immunohistochemistry
karyotyping Karyotyping
linkage-analysis Linkage analysis
methylation-analysis Methylation analysis
msi Microsatellite instability testing (MSI)
m-fish Multicolor FISH (M-FISH)
mutation-scanning-of-select-exons Mutation scanning of select exons
mutation-scanning-of-the-entire-coding-region Mutation scanning of the entire coding region
protein-analysis Protein analysis
protein-expression Protein expression
rna-analysis RNA analysis
sequence-analysis-of-select-exons Sequence analysis of select exons
sequence-analysis-of-the-entire-coding-region Sequence analysis of the entire coding region
sister-chromatid-exchange Sister chromatid exchange
targeted-variant-analysis Targeted variant analysis
udp Uniparental disomy study (UPD)
aspe Allele-specific primer extension (ASPE)
alternative-splicing-detection Alternative splicing detection
bi-directional-sanger-sequence-analysis Bi-directional Sanger Sequence Analysis
c-banding C-banding
cia Chemiluminescent Immunoassay (CIA)
chromatin-immunoprecipitation-on-chip Chromatin Immunoprecipitation on ChIP
comparative-genomic-hybridization Comparative Genomic Hybridization
damid DamID
digital-virtual-karyotyping Digital / Virtual karyotyping
digital-microfluidic-microspheres Digital microfluidic microspheres
enzymatic-levels Enzymatic levels
enzyme-activity Enzyme activity
elisa Enzyme-Linked Immunosorbent Assays (ELISA)
fluorometry Fluorometry
fusion-genes-microarrays Fusion genes microarrays
g-banding G-banding
gc-ms Gas chromatography–mass spectrometry (GC-MS)
gene-expression-profiling Gene expression profiling
gene-id GeneID
gold-nanoparticle-probe-technology Gold nanoparticle probe technology
hplc High-performance liquid chromatography (HPLC)
lc-ms Liquid chromatography mass spectrometry (LC-MS)
lc-ms-ms Liquid chromatography-tandem mass spectrometry (LC-MS/MS)
metabolite-levels Metabolite levels
methylation-specific-pcr Methylation-specific PCR
microarray Microarray
mlpa Multiplex Ligation-dependent Probe Amplification (MLPA)
ngs-mps Next-Generation (NGS)/Massively parallel sequencing (MPS)
ola Oligonucleotide Ligation Assay (OLA)
oligonucleotide-hybridization-based-dna-sequencing Oligonucleotide hybridization-based DNA sequencing
other Other
pcr PCR
pcr-with-allele-specific-hybridization PCR with allele specific hybridization
pcr-rflp-with-southern-hybridization PCR-RFLP with Southern hybridization
protein-truncation-test Protein truncation test
pyrosequencing Pyrosequencing
q-banding Q-banding
qpcr Quantitative PCR (qPCR)
r-banding R-banding
rflp RFLP
rt-lamp RT-LAMP
rt-pcr RT-PCR
rt-pcr-with-gel-analysis RT-PCR with gel analysis
rt-qpcr RT-qPCR
snp-detection SNP Detection
silver-staining Silver staining
sky Spectral karyotyping (SKY)
t-banding T-banding
ms-ms Tandem mass spectrometry (MS/MS)
tetra-nucleotide-repeat-by-pcr-or-southern-blot Tetra-nucleotide repeat by PCR or Southern Blot
tiling-arrays Tiling Arrays
trinucleotide-repeat-by-pcr-or-southern-blot Trinucleotide repeat by PCR or Southern Blot
uni-directional-sanger-sequencing Uni-directional Sanger sequencing
<status value="active"/><experimental value="true"/><date value="2022-08-16T16:49:24-05:00"/><publisher value="HL7 (FHIR Project)"/><contact><telecom><system value="url"/><value value="http://hl7.org/fhir"/></telecom><telecom><system value="email"/><value value="fhir@lists.hl7.org"/></telecom></contact><description value="The method type of the GenomicStudy analysis. These method types and relevant codes were pulled from [National Library of Medicine-Genetic Testing Registry](https://www.ncbi.nlm.nih.gov/gtr/) (NCBI-GTR) values of describing different testing methods on various levels: [major method category](https://ftp.ncbi.nlm.nih.gov/pub/GTR/standard_terms/Major_method_category.txt), [method category](https://ftp.ncbi.nlm.nih.gov/pub/GTR/standard_terms/Method_category.txt), and [primary methodology](https://ftp.ncbi.nlm.nih.gov/pub/GTR/standard_terms/Primary_test_methodology.txt)"/><jurisdiction><coding><system value="http://unstats.un.org/unsd/methods/m49/m49.htm"/><code value="001"/><display value="World"/></coding></jurisdiction><caseSensitive value="true"/><valueSet value="http://hl7.org/fhir/ValueSet/genomicstudy-methodtype"/><content value="complete"/><concept><code value="biochemical-genetics"/><display value="Biochemical Genetics"/></concept><concept><code value="cytogenetics"/><display value="Cytogenetics"/></concept><concept><code value="molecular-genetics"/><display value="Molecular Genetics"/></concept><concept><code value="analyte"/><display value="Analyte"/></concept><concept><code value="chromosome-breakage-studies"/><display value="Chromosome breakage studies"/></concept><concept><code value="deletion-duplication-analysis"/><display value="Deletion/duplication analysis"/></concept><concept><code value="detection-of-homozygosity"/><display value="Detection of homozygosity"/></concept><concept><code value="enzyme-assay"/><display value="Enzyme assay"/></concept><concept><code value="fish-interphase"/><display value="FISH-interphase"/></concept><concept><code value="fish-metaphase"/><display value="FISH-metaphase"/></concept><concept><code value="flow-cytometry"/><display value="Flow cytometry"/></concept><concept><code value="fish"/><display value="Fluorescence in situ hybridization (FISH)"/></concept><concept><code value="immunohistochemistry"/><display value="Immunohistochemistry"/></concept><concept><code value="karyotyping"/><display value="Karyotyping"/></concept><concept><code value="linkage-analysis"/><display value="Linkage analysis"/></concept><concept><code value="methylation-analysis"/><display value="Methylation analysis"/></concept><concept><code value="msi"/><display value="Microsatellite instability testing (MSI)"/></concept><concept><code value="m-fish"/><display value="Multicolor FISH (M-FISH)"/></concept><concept><code value="mutation-scanning-of-select-exons"/><display value="Mutation scanning of select exons"/></concept><concept><code value="mutation-scanning-of-the-entire-coding-region"/><display value="Mutation scanning of the entire coding region"/></concept><concept><code value="protein-analysis"/><display value="Protein analysis"/></concept><concept><code value="protein-expression"/><display value="Protein expression"/></concept><concept><code value="rna-analysis"/><display value="RNA analysis"/></concept><concept><code value="sequence-analysis-of-select-exons"/><display value="Sequence analysis of select exons"/></concept><concept><code value="sequence-analysis-of-the-entire-coding-region"/><display value="Sequence analysis of the entire coding region"/></concept><concept><code value="sister-chromatid-exchange"/><display value="Sister chromatid exchange"/></concept><concept><code value="targeted-variant-analysis"/><display value="Targeted variant analysis"/></concept><concept><code value="udp"/><display value="Uniparental disomy study (UPD)"/></concept><concept><code value="aspe"/><display value="Allele-specific primer extension (ASPE)"/></concept><concept><code value="alternative-splicing-detection"/><display value="Alternative splicing detection"/></concept><concept><code value="bi-directional-sanger-sequence-analysis"/><display value="Bi-directional Sanger Sequence Analysis"/></concept><concept><code value="c-banding"/><display value="C-banding"/></concept><concept><code value="cia"/><display value="Chemiluminescent Immunoassay (CIA)"/></concept><concept><code value="chromatin-immunoprecipitation-on-chip"/><display value="Chromatin Immunoprecipitation on ChIP"/></concept><concept><code value="comparative-genomic-hybridization"/><display value="Comparative Genomic Hybridization"/></concept><concept><code value="damid"/><display value="DamID"/></concept><concept><code value="digital-virtual-karyotyping"/><display value="Digital / Virtual karyotyping"/></concept><concept><code value="digital-microfluidic-microspheres"/><display value="Digital microfluidic microspheres"/></concept><concept><code value="enzymatic-levels"/><display value="Enzymatic levels"/></concept><concept><code value="enzyme-activity"/><display value="Enzyme activity"/></concept><concept><code value="elisa"/><display value="Enzyme-Linked Immunosorbent Assays (ELISA)"/></concept><concept><code value="fluorometry"/><display value="Fluorometry"/></concept><concept><code value="fusion-genes-microarrays"/><display value="Fusion genes microarrays"/></concept><concept><code value="g-banding"/><display value="G-banding"/></concept><concept><code value="gc-ms"/><display value="Gas chromatography–mass spectrometry (GC-MS)"/></concept><concept><code value="gene-expression-profiling"/><display value="Gene expression profiling"/></concept><concept><code value="gene-id"/><display value="GeneID"/></concept><concept><code value="gold-nanoparticle-probe-technology"/><display value="Gold nanoparticle probe technology"/></concept><concept><code value="hplc"/><display value="High-performance liquid chromatography (HPLC)"/></concept><concept><code value="lc-ms"/><display value="Liquid chromatography mass spectrometry (LC-MS)"/></concept><concept><code value="lc-ms-ms"/><display value="Liquid chromatography-tandem mass spectrometry (LC-MS/MS)"/></concept><concept><code value="metabolite-levels"/><display value="Metabolite levels"/></concept><concept><code value="methylation-specific-pcr"/><display value="Methylation-specific PCR"/></concept><concept><code value="microarray"/><display value="Microarray"/></concept><concept><code value="mlpa"/><display value="Multiplex Ligation-dependent Probe Amplification (MLPA)"/></concept><concept><code value="ngs-mps"/><display value="Next-Generation (NGS)/Massively parallel sequencing (MPS)"/></concept><concept><code value="ola"/><display value="Oligonucleotide Ligation Assay (OLA)"/></concept><concept><code value="oligonucleotide-hybridization-based-dna-sequencing"/><display value="Oligonucleotide hybridization-based DNA sequencing"/></concept><concept><code value="other"/><display value="Other"/></concept><concept><code value="pcr"/><display value="PCR"/></concept><concept><code value="pcr-with-allele-specific-hybridization"/><display value="PCR with allele specific hybridization"/></concept><concept><code value="pcr-rflp-with-southern-hybridization"/><display value="PCR-RFLP with Southern hybridization"/></concept><concept><code value="protein-truncation-test"/><display value="Protein truncation test"/></concept><concept><code value="pyrosequencing"/><display value="Pyrosequencing"/></concept><concept><code value="q-banding"/><display value="Q-banding"/></concept><concept><code value="qpcr"/><display value="Quantitative PCR (qPCR)"/></concept><concept><code value="r-banding"/><display value="R-banding"/></concept><concept><code value="rflp"/><display value="RFLP"/></concept><concept><code value="rt-lamp"/><display value="RT-LAMP"/></concept><concept><code value="rt-pcr"/><display value="RT-PCR"/></concept><concept><code value="rt-pcr-with-gel-analysis"/><display value="RT-PCR with gel analysis"/></concept><concept><code value="rt-qpcr"/><display value="RT-qPCR"/></concept><concept><code value="snp-detection"/><display value="SNP Detection"/></concept><concept><code value="silver-staining"/><display value="Silver staining"/></concept><concept><code value="sky"/><display value="Spectral karyotyping (SKY)"/></concept><concept><code value="t-banding"/><display value="T-banding"/></concept><concept><code value="ms-ms"/><display value="Tandem mass spectrometry (MS/MS)"/></concept><concept><code value="tetra-nucleotide-repeat-by-pcr-or-southern-blot"/><display value="Tetra-nucleotide repeat by PCR or Southern Blot"/></concept><concept><code value="tiling-arrays"/><display value="Tiling Arrays"/></concept><concept><code value="trinucleotide-repeat-by-pcr-or-southern-blot"/><display value="Trinucleotide repeat by PCR or Southern Blot"/></concept><concept><code value="uni-directional-sanger-sequencing"/><display value="Uni-directional Sanger sequencing"/></concept></CodeSystem>