Simple Sequence example 1

{
  "resourceType" : "MolecularDefinition",
  "id" : "example-sequence1",
  "moleculeType" : {
    "coding" : [{
      "system" : "http://hl7.org/fhir/sequence-type",
      "code" : "dna",
      "display" : "DNA Sequence"
    }]
  },
  "representation" : [{
    "literal" : {
      "value" : "ATGAACAGACAAGTAAAAGACATGACAGYGATACTTTCCCAGAGCTGAAGTTAACAAATGCACCTGGTTC TTTTACTAAGTGTTCAAATACCAGTGAACTTAAAGAATTTGTCAATCCTAGCCTTCCAAGAGAAGAAAAA GAAGAGAAACTAGAAACAGTTAAAGTGTCTAATAATGCTGAAGACCCCAAAGATCTCATGTTAAGTGGAG AAAGGGTTTTGCAAACTGAAAGATCTGTAGAGAGTAGCAGTATTTCAYTGGTACCTGGTACTGATTATGG CACTCAGGAAAGTATCTCGTTACTGGAAGTTAGCACTCTAGGGAAGGCAAAAACAGAACCAAATAAATGT GTGAGTCAGTGTGCAGCATTTGAAAACCCCAAGGGACTAATTCATGGTTGTTCCAAAGATAATAGAAATG ACACAGAAGGCTTTAAGTATCCATTGGGACATGAAGTTAACCACAGTCGGGAAACAAGCATAGAAATGGA AGAAAGTGAACTTGATGCTCAGTATTTGCAGAATACATTCAAGGTTTCAAAGCGCCAGTCATTTGCTCYG TTTTCAAATCCAGGAAATGCAGAAGAGGAATGTGCAACATTCTCTGCCCACTCTGGGTCCTTAAAGAAAC AAAGTCCAAAAGTCACTTTTGAATGTGAACAAAAGGAAGAAAATCAAGGAAAGAATGAGTCTAATATCAA GCCTGTACAGACAGTTAATATCACTGCAGGCTTTCCTGTGGTTGGTCAGAAAGA"
    },
    "resolvable" : {
      "reference" : "DocumentReference/example-genomicFile-mw7162561"
    },
    "extracted" : {
      "startingMolecule" : {
        "reference" : "MolecularDefinition/example-starting-sequence-2b-extracted",
        "type" : "MolecularDefinition",
        "display" : "Starting Sequence Resource:                 ATGAACAGACAAGTAAAAGACATGACAGYGATACTTTCCCAGAGCTGAAGTTAACAAATGCACCTGGTTC                 TTTTACTAAGTGTTCAAATACCAGTGAACTTAAAGAATTTGTCAATCCTAGCCTTCCAAGAGAAGAAAAA                 GAAGAGAAACTAGAAACAGTTAAAGTGTCTAATAATGCTGAAGACCCCAAAGATCTCATGTTAAGTGGAG                 AAAGGGTTTTGCAAACTGAAAGATCTGTAGAGAGTAGCAGTATTTCAYTGGTACCTGGTACTGATTATGG                 CACTCAGGAAAGTATCTCGTTACTGGAAGTTAGCACTCTAGGGAAGGCAAAAACAGAACCAAATAAATGT                 GTGAGTCAGTGTGCAGCATTTGAAAACCCCAAGGGACTAATTCATGGTTGTTCCAAAGATAATAGAAATG                 ACACAGAAGGCTTTAAGTATCCATTGGGACATGAAGTTAACCACAGTCGGGAAACAAGCATAGAAATGGA                 AGAAAGTGAACTTGATGCTCAGTATTTGCAGAATACATTCAAGGTTTCAAAGCGCCAGTCATTTGCTCYG                 TTTTCAAATCCAGGAAATGCAGAAGAGGAATGTGCAACATTCTCTGCCCACTCTGGGTCCTTAAAGAAAC                 AAAGTCCAAAAGTCACTTTTGAATGTGAACAAAAGGAAGAAAATCAAGGAAAGAATGAGTCTAATATCAA                 GCCTGTACAGACAGTTAATATCACTGCAGGCTTTCCTGTGGTTGGTCAGAAAGAGCCTGTACAGACAGTT                 AATATCACTGCAGGCTTTCCTGTGGTTGGTCAGAAAGA"
      },
      "coordinateInterval" : {
        "coordinateSystem" : {
          "system" : {
            "coding" : [{
              "system" : "http://loinc.org",
              "code" : "LA30100-4",
              "display" : "0-based interval counting"
            }],
            "text" : "0-based interval counting"
          }
        }
      },
      "reverseComplement" : false
    },
    "concatenated" : {
      "sequenceElement" : [{
        "sequence" : {
          "reference" : "MolecularDefinition/example-sequence0-2b-concatenated",
          "type" : "MolecularDefinition",
          "display" : "Sequence-of index 0-Resource for concatenated sequence example:                     ATGAACAGACAAGTAAAAGACATGACAGYGATACTTTCCCAGAGCTGAAGTTAACAAATGCACCTGGTTC TTTTACTAAGTGTTCAAATACCAGTGAACTTAAAGAATTTGTCAATCCTAGCCTTCCAAGAGAAGAAAAA GAAGAGAAACTAGAAACAGTTAAAGTGTCTAATAATGCTGAAGACCCCAAAGATCTCATGTTAAGTGGAG"
        },
        "ordinalIndex" : 0
      },
      {
        "sequence" : {
          "reference" : "MolecularDefinition/example-sequence1-2b-concatenated",
          "type" : "MolecularDefinition",
          "display" : "Sequence-of index 1-Resource for concatenated sequence example:                     AAAGGGTTTTGCAAACTGAAAGATCTGTAGAGAGTAGCAGTATTTCAYTGGTACCTGGTACTGATTATGG CACTCAGGAAAGTATCTCGTTACTGGAAGTTAGCACTCTAGGGAAGGCAAAAACAGAACCAAATAAATGT GTGAGTCAGTGTGCAGCATTTGAAAACCCCAAGGGACTAATTCATGGTTGTTCCAAAGATAATAGAAATG ACACAGAAGGCTTTAAGTATCCATTGGGACATGAAGTTAACCACAGTCGGGAAACAAGCATAGAAATGGA AGAAAGTGAACTTGATGCTCAGTATTTGCAGAATACATTCAAGGTTTCAAAGCGCCAGTCATTTGCTCYG"
        },
        "ordinalIndex" : 1
      },
      {
        "sequence" : {
          "reference" : "MolecularDefinition/example-sequence2-2b-concatenated",
          "type" : "MolecularDefinition",
          "display" : "Sequence-of index 2-Resource for concatenated sequence example:                     TTTTCAAATCCAGGAAATGCAGAAGAGGAATGTGCAACATTCTCTGCCCACTCTGGGTCCTTAAAGAAAC AAAGTCCAAAAGTCACTTTTGAATGTGAACAAAAGGAAGAAAATCAAGGAAAGAATGAGTCTAATATCAA GCCTGTACAGACAGTTAATATCACTGCAGGCTTTCCTGTGGTTGGTCAGAAAGA"
        },
        "ordinalIndex" : 2
      }]
    },
    "relative" : {
      "startingMolecule" : {
        "reference" : "MolecularDefinition/example-starting-sequence-2b-relative",
        "type" : "MolecularDefinition",
        "display" : "Starting Sequence Resource"
      },
      "edit" : [{
        "coordinateInterval" : {
          "coordinateSystem" : {
            "system" : {
              "coding" : [{
                "system" : "http://loinc.org",
                "code" : "LA30100-4",
                "display" : "0-based interval counting"
              }],
              "text" : "0-based interval counting"
            }
          }
        },
        "replacementMolecule" : {
          "reference" : "MolecularDefinition/example-replacement-sequence",
          "type" : "MolecularDefinition",
          "display" : "Replacement Sequence Resource: ATGAA"
        },
        "replacedMolecule" : {
          "reference" : "MolecularDefinition/example-replaced-sequence",
          "type" : "MolecularDefinition",
          "display" : "Replaced Sequence Resource: CCCCC"
        }
      }]
    }
  }]
}