R6 Ballot (2nd Draft)

Publish-box (todo)

Example MolecularDefinition/example-haplotype2 (XML)

Clinical Genomics Work GroupMaturity Level: N/AStandards Status: InformativeCompartments: No defined compartments

Raw XML (canonical form + also see XML Format Specification)

Simple Haplotype example 2 (id = "example-haplotype2")

<?xml version="1.0" encoding="UTF-8"?>

<MolecularDefinition xmlns="http://hl7.org/fhir">
  <id value="example-haplotype2"/> 
  <meta> 
    <profile value="http://hl7.org/fhir/StructureDefinition/haplotype"/> 
  </meta> 
  <type value="dna"/> 
  <location> 
    <sequenceLocation> 
      <sequenceContext> 
        <reference value="MolecularDefinition/example-sequence-hla000011"/> 
        <type value="MolecularDefinition"/> 
        <display value="Starting Sequence Resource: HLA00001 (A*01:01:01:01)"/> 
      </sequenceContext> 
    </sequenceLocation> 
  </location> 
  <memberState> 
    <reference value="MolecularDefinition/example-allele3"/> 
    <type value="MolecularDefinition"/> 
    <display value="First Allele, HLA00001.1:c.98T&gt;C"/> 
  </memberState> 
  <memberState> 
    <reference value="MolecularDefinition/example-allele4"/> 
    <type value="MolecularDefinition"/> 
    <display value="Second Allele, HLA00001.1:c.121C&gt;A"/> 
  </memberState> 
  <memberState> 
    <reference value="MolecularDefinition/example-allele5"/> 
    <type value="MolecularDefinition"/> 
    <display value="Third Allele, HLA00001.1:c.123C&gt;T"/> 
  </memberState> 
  <memberState> 
    <reference value="MolecularDefinition/example-allele6"/> 
    <type value="MolecularDefinition"/> 
    <display value="Fourth Allele, HLA00001.1:c.126G&gt;A"/> 
  </memberState> 
  <memberState> 
    <reference value="MolecularDefinition/example-allele7"/> 
    <type value="MolecularDefinition"/> 
    <display value="Fifth Allele, HLA00001.1:c.144C&gt;A"/> 
  </memberState> 
</MolecularDefinition> 

Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.