Example Specimen/pooled-serum (Turtle)
Raw Turtle (+ also see Turtle/RDF Format Specification)
Pooled serum sample
@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
# - resource -------------------------------------------------------------------
[a fhir:Specimen;
fhir:nodeRole fhir:treeRoot;
fhir:Resource.id [ fhir:value "pooled-serum"]; #
fhir:DomainResource.text [
fhir:Narrative.status [ fhir:value "generated" ];
fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Specimen</b><a name=\"pooled-serum\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Specimen "pooled-serum" </p></div><p><b>accessionIdentifier</b>: <span title=\" the accessionId assigned by the lab \">id: 20171120-1234</span></p><p><b>type</b>: <span title=\" Pooled serum sample from 30 individuals in the herd- no Snomed Code for this - used a made up local code \">Pooled serum sample <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (vdl#Serum sample, pooled "Serum sample, pooled")</span></span></p><p><b>subject</b>: <span title=\" subject is a herd of breeding sows \"><a href=\"group-example-herd1.html\">Group/herd1</a> "Breeding herd"</span></p><p><b>combined</b>: pooled</p><h3>Collections</h3><table class=\"grid\"><tr><td>-</td><td><b>Collector</b></td><td><b>Collected[x]</b></td></tr><tr><td>*</td><td><span>: James Herriot, FRCVS</span></td><td>2017-11-14</td></tr></table><h3>Containers</h3><table class=\"grid\"><tr><td>-</td><td><b>Device</b></td></tr><tr><td>*</td><td><a href=\"broken-link.html\">Specimen/specimen-device-container-example-red-top-vacutainer</a></td></tr></table><p><b>note</b>: Pooled serum sample from 30 individuals</p></div>"
]; # the accessionId assigned by the lab
fhir:Specimen.accessionIdentifier [
fhir:Identifier.system [ fhir:value "https://vetmed.iastate.edu/vdl" ];
fhir:Identifier.value [ fhir:value "20171120-1234" ]
]; #
fhir:Specimen.type [
fhir:CodeableConcept.coding [
fhir:index 0;
fhir:Coding.system [ fhir:value "https://vetmed.iastate.edu/vdl" ];
fhir:Coding.code [ fhir:value "Serum sample, pooled" ];
fhir:Coding.display [ fhir:value "Serum sample, pooled" ]
];
fhir:CodeableConcept.text [ fhir:value "Pooled serum sample" ]
]; # Pooled serum sample from 30 individuals in the herd- no Snomed Code for this - used a made up local code
fhir:Specimen.subject [
fhir:Reference.reference [ fhir:value "Group/herd1" ]
]; # subject is a herd of breeding sows
fhir:Specimen.combined [ fhir:value "pooled"]; #
fhir:Specimen.collection [
fhir:Specimen.collection.collector [
fhir:Reference.display [ fhir:value "James Herriot, FRCVS" ]
];
fhir:Specimen.collection.collectedDateTime [ fhir:value "2017-11-14"^^xsd:date ]
]; #
fhir:Specimen.container [
fhir:index 0;
fhir:Specimen.container.device [
fhir:Reference.reference [ fhir:value "Specimen/specimen-device-container-example-red-top-vacutainer" ]
]
]; #
fhir:Specimen.note [
fhir:index 0;
fhir:Annotation.text [ fhir:value "Pooled serum sample from 30 individuals" ]
]] . #
# - ontology header ------------------------------------------------------------
[a owl:Ontology;
owl:imports fhir:fhir.ttl] .
# -------------------------------------------------------------------------------------
Usage note: every effort has been made to ensure that the
examples are correct and useful, but they are not a normative part
of the specification.