DocumentReference-CNVAnalysis_called.xml

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Example GenomicStudy/CNVAnalysis-called (XML)

Clinical Genomics Work Group

Maturity Level: N/A

Standards Status: Informative

Compartments: Patient

Raw XML (canonical form + also see XML Format Specification)

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DocumentReference - CNV Analysis - called (id = "CNVAnalysis-called")

<?xml version="1.0" encoding="UTF-8"?>

<DocumentReference xmlns="http://hl7.org/fhir">
  <id value="CNVAnalysis-called"/> 
  <text> 
    <status value="generated"/> <div xmlns="http://www.w3.org/1999/xhtml"><p> <b> Generated Narrative</b> </p> <div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px
       solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource &quot;CNVAnalysis_called&quot; </p> </div> <p> <b> identifier</b> : id: 11120</p> <p> <b> status</b> : current</p> <p> <b> docStatus</b> : preliminary</p> <p> <b> description</b> : A sample Document Reference instance representing a BED file that may be used as input
         or output of a genomic analysis pipeline.</p> <p> <b> securityLabel</b> : Restricted <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="http://terminology.hl7.org/3.1.0/CodeSystem-v3-Confidentiality.html">Confidentiality</a> #R)</span> </p> <blockquote> <p> <b> content</b> </p> </blockquote> </div> 
  </text> 
  <identifier> 
    <system value="http://www.somesystemabc.net/identifiers/files"/> 
    <value value="11120"/> 
  </identifier> 
  <status value="current"/> 
  <docStatus value="preliminary"/> 
  <description value="CNVAnalysis_called: A sample Document Reference instance representing a BED file that
   may be used as input or output of a genomic analysis pipeline."/> 
  <securityLabel> 
    <coding> 
      <system value="http://terminology.hl7.org/CodeSystem/v3-Confidentiality"/> 
      <code value="R"/> 
      <display value="Restricted"/> 
    </coding> 
  </securityLabel> 
  <content> 
    <attachment> 
      <url value="https://chat.fhir.org/user_uploads/10155/Hnv3LtumKn-1QjeyS2KVuw4R/CNVAnalysis_called.bed"/>  <!--   This line may need to be changed later   -->
      <title value="CNVAnalysis_called"/> 
      <creation value="2019-03-01T01:02:01+01:00"/> 
    </attachment> 
  </content> 
</DocumentReference>

Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.