Observation-example-haplotype1.json

Example of haplotype data that is basis of a diplotype data

{
  "resourceType": "Observation",
  "id": "example-haplotype1",
  "text": {
    "status": "extensions",
    "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative</b></p><div><p>Resource &quot;example-haplotype1&quot; </p></div><p><b>Gene</b>: CYP2D6 <span> (<a>HUGO Gene Nomenclature</a>#2625)</span></p><p><b>status</b>: unknown</p><p><b>code</b>: The material on this page will be removed in a future release. This content is deprecated and SHOULD NOT be used. Implementers are instead directed to the ([Genomics Reporting Implementation Guide](http://hl7.org/fhir/uv/genomics-reporting/index.html)) for guidance. Genetic analysis master panel-- This is the parent OBR for the panel holding all of the associated observations that can be reported with a molecular genetics analysis result. <span> (<a>LOINC</a>#55233-1)</span></p><p><b>subject</b>: <a>Patient/727127: J*********** C***********</a></p><p><b>issued</b>: 4 Apr. 2013, 1:30:10 am</p><p><b>value</b>: *35B <span> (pharmakb.org#PA165971587)</span></p><p><b>specimen</b>: <a>Specimen/genetics-example1-somatic: Molecular Specimen ID: MLD45-Z4-1234</a></p><p><b>derivedFrom</b>: </p><ul><li><a>MolecularSequence/example-pgx-1</a></li><li><a>MolecularSequence/example-pgx-2</a></li></ul></div>"
  },
  "extension": [
    {
      "url": "http://hl7.org/fhir/StructureDefinition/observation-geneticsGene",
      "valueCodeableConcept": {
        "coding": [
          {
            "system": "http://www.genenames.org",
            "code": "2625",
            "display": "CYP2D6"
          }
        ]
      }
    }
  ],
  "status": "unknown",
  "code": {
    "coding": [
      {
        "system": "http://loinc.org",
        "code": "55233-1",
        "display": "The material on this page will be removed in a future release. This content is deprecated and SHOULD NOT be used. Implementers are instead directed to the ([Genomics Reporting Implementation Guide](http://hl7.org/fhir/uv/genomics-reporting/index.html)) for guidance. Genetic analysis master panel-- This is the parent OBR for the panel holding all of the associated observations that can be reported with a molecular genetics analysis result."
      }
    ]
  },
  "subject": {
    "reference": "Patient/727127",
    "display": "J*********** C***********"
  },
  "issued": "2013-04-03T15:30:10+01:00",
  "valueCodeableConcept": {
    "coding": [
      {
        "system": "http://pharmakb.org",
        "code": "PA165971587",
        "display": "*35B"
      }
    ]
  },
  "specimen": {
    "reference": "Specimen/genetics-example1-somatic",
    "display": "Molecular Specimen ID: MLD45-Z4-1234"
  },
  "derivedFrom": [
    {
      "reference": "MolecularSequence/example-pgx-1"
    },
    {
      "reference": "MolecularSequence/example-pgx-2"
    }
  ]
}