Diagnosticreport-example-pgx.ttl

An example of a PGx haplotype report

@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

<http://hl7.org/fhir/DiagnosticReport/example-pgx> a fhir:DiagnosticReport;
  fhir:nodeRole fhir:treeRoot;
  fhir:Resource.id [ fhir:value "example-pgx"];
  fhir:DomainResource.text [
     fhir:Narrative.status [ fhir:value "generated" ];
     fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><h2><span>Pharmacogenetics Report</span> </h2><table><tr><td>Subject</td><td>Unable to get Patient Details</td></tr><tr><td>When For</td><td>2016-10-15T12:34:56+11:00</td></tr><tr><td>Reported</td><td>2016-10-20T14:00:05+11:00</td></tr></table><p><b>Report Details</b></p><table><tr><td><b>Code</b></td><td><b>Value</b></td><td><b>Reported</b></td></tr><tr><td><a><span>The material on this page will be removed in a future release. This content is deprecated and SHOULD NOT be used. Implementers are instead directed to the ([Genomics Reporting Implementation Guide](http://hl7.org/fhir/uv/genomics-reporting/index.html)) for guidance. CYP2C9 gene product metabolic activity interpretation</span></a></td><td><span>Normal metabolizer</span></td><td>2013-04-03T15:30:10+01:00</td></tr></table></div>"
  ];
  fhir:DiagnosticReport.basedOn [
     fhir:index 0;
     fhir:link <http://hl7.org/fhir/ServiceRequest/example-pgx>;
     fhir:Reference.reference [ fhir:value "ServiceRequest/example-pgx" ]
  ];
  fhir:DiagnosticReport.status [ fhir:value "final"];
  fhir:DiagnosticReport.code [
     fhir:CodeableConcept.coding [
       fhir:index 0;
       fhir:Coding.system [ fhir:value "https://system/PGxReport" ];
       fhir:Coding.code [ fhir:value "PGxReport" ];
       fhir:Coding.display [ fhir:value "Pharmacogenetics Report" ]
     ];
     fhir:CodeableConcept.text [ fhir:value "Pharmacogenetics Report" ]
  ];
  fhir:DiagnosticReport.subject [
     fhir:link <http://hl7.org/fhir/Patient/899962>;
     fhir:Reference.reference [ fhir:value "Patient/899962" ];
     fhir:Reference.display [ fhir:value "Bob Smith" ]
  ];
  fhir:DiagnosticReport.effectiveDateTime [ fhir:value "2016-10-15T12:34:56+11:00"^^xsd:dateTime];
  fhir:DiagnosticReport.issued [ fhir:value "2016-10-20T14:00:05+11:00"^^xsd:dateTime];
  fhir:DiagnosticReport.performer [
     fhir:index 0;
     fhir:link <http://hl7.org/fhir/Organization/4829>;
     fhir:Reference.reference [ fhir:value "Organization/4829" ]
  ];
  fhir:DiagnosticReport.result [
     fhir:index 0;
     fhir:link <http://hl7.org/fhir/Observation/example-phenotype>;
     fhir:Reference.reference [ fhir:value "Observation/example-phenotype" ]
  ];
  fhir:DiagnosticReport.presentedForm [
     fhir:index 0;
     fhir:Attachment.contentType [ fhir:value "application/pdf" ];
     fhir:Attachment.language [ fhir:value "en" ];
     fhir:Attachment.data [ fhir:value "cGRmSW5CYXNlNjRCaW5hcnk="^^xsd:base64Binary ];
     fhir:Attachment.hash [ fhir:value "571ef9c5655840f324e679072ed62b1b95eef8a0"^^xsd:base64Binary ];
     fhir:Attachment.title [ fhir:value "Pharmacogenetics Report" ];
     fhir:Attachment.creation [ fhir:value "2016-10-20T20:00:00+11:00"^^xsd:dateTime ]
  ] .

<http://hl7.org/fhir/ServiceRequest/example-pgx> a fhir:ServiceRequest .

<http://hl7.org/fhir/Patient/899962> a fhir:Patient .

<http://hl7.org/fhir/Organization/4829> a fhir:Organization .

<http://hl7.org/fhir/Observation/example-phenotype> a fhir:Observation .

# - ontology header ------------------------------------------------------------

<http://hl7.org/fhir/DiagnosticReport/example-pgx.ttl> a owl:Ontology;
  owl:imports fhir:fhir.ttl;
  owl:versionIRI <http://build.fhir.org/DiagnosticReport/example-pgx.ttl> .

# -------------------------------------------------------------------------------------