Release 5 Ballot

This page is part of the FHIR Specification (v5.0.0-ballot: R5 Ballot - see ballot notes). The current version which supercedes this version is 5.0.0. For a full list of available versions, see the Directory of published versions

Example GenomicStudy/genomicSpecimen (JSON)

Clinical Genomics Work GroupMaturity Level: N/AStandards Status: InformativeCompartments: Patient

Raw JSON (canonical form + also see JSON Format Specification)

Specimen - Genomic

{
  "resourceType": "Specimen",
  "id": "genomicSpecimen",
  "text": {
    "status": "generated",
    "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative</b></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource &quot;genomicSpecimen&quot; </p></div><p><b>identifier</b>: id: 4</p><p><b>status</b>: available</p><p><b>type</b>: Specimen from lung obtained by biopsy (specimen)  <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://browser.ihtsdotools.org/\">SNOMED CT</a>#122610009)</span></p><p><b>subject</b>: <a href=\"Patient-genomicPatient.html\">Patient/genomicPatient: John Doe</a> &quot; DOE&quot;</p><p><b>receivedTime</b>: 2019-03-01 01:01:01+0000</p><p><b>request</b>: <a href=\"ServiceRequest-genomicServiceRequest.html\">ServiceRequest/genomicServiceRequest</a></p><h3>Collections</h3><table class=\"grid\"><tr><td>-</td><td><b>Collector</b></td><td><b>Collected[x]</b></td><td><b>Quantity</b></td><td><b>Method</b></td></tr><tr><td>*</td><td><a href=\"Practitioner-practitioner01.html\">Practitioner/practitioner01</a> &quot; DOEL&quot;</td><td>2019-03-01 01:01:00+0000</td><td>1 mm2</td><td>Biopsy - action <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://browser.ihtsdotools.org/\">SNOMED CT</a>#129314006)</span></td></tr></table></div>"
  },
  "identifier": [
    {
      "system": "http://www.somesystemabc.net/identifiers/specimens",
      "value": "4"
    }
  ],
  "status": "available",
  "type": {
    "coding": [
      {
        "system": "http://snomed.info/sct",
        "code": "122610009",
        "display": "Specimen from lung obtained by biopsy (specimen) "
      }
    ]
  },
  "subject": {
    "reference": "Patient/genomicPatient",
    "display": "John Doe"
  },
  "receivedTime": "2019-03-01T01:01:01Z",
  "request": [
    {
      "reference": "ServiceRequest/genomicServiceRequest"
    }
  ],
  "collection": {
    "collector": {
      "reference": "Practitioner/practitioner01"
    },
    "collectedDateTime": "2019-03-01T01:01:00Z",
    "quantity": {
      "value": 1,
      "unit": "mm2"
    },
    "method": {
      "coding": [
        {
          "system": "http://snomed.info/sct",
          "code": "129314006",
          "display": "Biopsy - action"
        }
      ]
    }
  }
}

Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.