R4 Ballot #2 (Mixed Normative/Trial use)

This page is part of the FHIR Specification (v3.5.0: R4 Ballot #2). The current version which supercedes this version is 5.0.0. For a full list of available versions, see the Directory of published versions . Page versions: R5 R4B R4 R3

Coord-1base-example

Clinical Genomics Work Group

Maturity Level: N/A

Ballot Status: Informative

Compartments: Not linked to any defined compartments

This is the narrative for the resource. See also the XML, JSON or Turtle format. This example conforms to the profile Sequence.

Generated Narrative with Details

id: coord-1-base

type: dna

coordinateSystem: 1

ReferenceSeqs

-

ReferenceSeqString

Strand

WindowStart

WindowEnd

*

ACGTAGTC

watson

1

8

variant
start: 2
end: 3
observedAllele: ATG
referenceAllele: -
cigar: 3I

variant
start: 5
end: 5
observedAllele: T
referenceAllele: A
cigar: 3I

variant
start: 7
end: 7
observedAllele: -
referenceAllele: T
cigar: 1D

observedSeq: ACATGGTAGC

Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.