This page is part of the FHIR Specification (v3.5.0: R4 Ballot #2). The current version which supercedes this version is 5.0.0. For a full list of available versions, see the Directory of published versions . Page versions: R5 R4B R4 R3
Clinical Genomics Work Group | Maturity Level: N/A | Ballot Status: Informative |
Raw XML (canonical form + also see XML Format Specification)
Definition for Code System sequenceType
<?xml version="1.0" encoding="UTF-8"?> <CodeSystem xmlns="http://hl7.org/fhir"> <id value="sequence-type"/> <meta> <lastUpdated value="2018-08-19T21:48:56.559+10:00"/> </meta> <text> <status value="generated"/> <div xmlns="http://www.w3.org/1999/xhtml"> <h2> sequenceType</h2> <div> <p> Type if a sequence -- DNA, RNA, or amino acid sequence.</p> </div> <p> This code system http://hl7.org/fhir/sequence-type defines the following codes:</p> <table class="codes"> <tr> <td style="white-space:nowrap"> <b> Code</b> </td> <td> <b> Display</b> </td> <td> <b> Definition</b> </td> </tr> <tr> <td style="white-space:nowrap">aa <a name="sequence-type-aa"> </a> </td> <td> AA Sequence</td> <td> Amino acid sequence.</td> </tr> <tr> <td style="white-space:nowrap">dna <a name="sequence-type-dna"> </a> </td> <td> DNA Sequence</td> <td> DNA Sequence.</td> </tr> <tr> <td style="white-space:nowrap">rna <a name="sequence-type-rna"> </a> </td> <td> RNA Sequence</td> <td> RNA Sequence.</td> </tr> </table> </div> </text> <extension url="http://hl7.org/fhir/StructureDefinition/structuredefinition-wg"> <valueCode value="cg"/> </extension> <extension url="http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status"> <valueString value="Draft"/> </extension> <extension url="http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm"> <valueInteger value="1"/> </extension> <url value="http://hl7.org/fhir/sequence-type"/> <identifier> <system value="urn:ietf:rfc:3986"/> <value value="urn:oid:2.16.840.1.113883.4.642.1.220"/> </identifier> <version value="3.5.0"/> <name value="sequenceType"/> <title value="sequenceType"/> <status value="draft"/> <experimental value="false"/> <date value="2018-08-19T21:48:56+10:00"/> <publisher value="HL7 (FHIR Project)"/> <contact> <telecom> <system value="url"/> <value value="http://hl7.org/fhir"/> </telecom> <telecom> <system value="email"/> <value value="fhir@lists.hl7.org"/> </telecom> </contact> <description value="Type if a sequence -- DNA, RNA, or amino acid sequence."/> <caseSensitive value="true"/> <valueSet value="http://hl7.org/fhir/ValueSet/sequence-type"/> <content value="complete"/> <concept> <code value="aa"/> <display value="AA Sequence"/> <definition value="Amino acid sequence."/> </concept> <concept> <code value="dna"/> <display value="DNA Sequence"/> <definition value="DNA Sequence."/> </concept> <concept> <code value="rna"/> <display value="RNA Sequence"/> <definition value="RNA Sequence."/> </concept> </CodeSystem>
Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.