STU3 Candidate

This page is part of the FHIR Specification (v1.8.0: STU 3 Draft). The current version which supercedes this version is 5.0.0. For a full list of available versions, see the Directory of published versions . Page versions: R4B R4 R3

Sequence-graphic-example-1.xml

Raw XML (canonical form)

Sequence Graphic example-1 (id = "graphic-example-1")

<Sequence xmlns="http://hl7.org/fhir">
    <id value="graphic-example-1"/>
    <text><status value="generated"/><div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative with Details</b></p><p><b>id</b>: graphic-example-1</p><p><b>type</b>: DNA</p><p><b>coordinateSystem</b>: 0</p><h3>ReferenceSeqs</h3><table><tr><td>-</td><td><b>ReferenceSeqId</b></td><td><b>Strand</b></td><td><b>WindowStart</b></td><td><b>WindowEnd</b></td></tr><tr><td>*</td><td>NC_000002.12 <span>(Details : {http://www.ncbi.nlm.nih.gov/nuccore code 'NC_000002.12' = 'NC_000002.12)</span></td><td>1</td><td>128273724</td><td>128273732</td></tr></table><h3>Variants</h3><table><tr><td>-</td><td><b>Start</b></td><td><b>End</b></td><td><b>ObservedAllele</b></td><td><b>ReferenceAllele</b></td><td><b>Cigar</b></td></tr><tr><td>*</td><td>128273725</td><td>128273726</td><td>G</td><td>T</td><td>1M</td></tr></table><p><b>pointer</b>: <a>Sequence/graphic-example-2</a></p></div></text><type value="DNA"/>
    <coordinateSystem value="0"/>
    <referenceSeq>
        <referenceSeqId>
          <coding>
            <system value="http://www.ncbi.nlm.nih.gov/nuccore"/>
            <code value="NC_000002.12"/>
          </coding>
        </referenceSeqId>
        <strand value="1"/>
        <windowStart value="128273724"/>
        <windowEnd value="128273732"/>
    </referenceSeq>
    <variant>
        <start value="128273725"/>
        <end value="128273726"/>
        <observedAllele value="G"/>
        <referenceAllele value="T"/>
        <cigar value="1M"/>
    </variant>
    <pointer>
        <reference value="Sequence/graphic-example-2"/>
    </pointer>
</Sequence>

Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.