Observation-example-haplotype2.xml

Example of another haplotype data that is basis of a diplotype data (id = "example-haplotype2")

<Observation xmlns="http://hl7.org/fhir">
    <id value="example-haplotype2"/>
    <text><status value="generated"/><div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative with Details</b></p><p><b>id</b>: example-haplotype2</p><p><b>status</b>: unknown</p><p><b>code</b>: Genetic analysis master panel-- This is the parent OBR for the panel holding all of
         the associated observations that can be reported with a molecular genetics analysis result.
         <span>(Details : {LOINC code '55233-1' = 'Genetic analysis master panel - Blood or Tissue by
           Molecular genetics method', given as 'Genetic analysis master panel-- This is the parent
           OBR for the panel holding all of the associated observations that can be reported with
           a molecular genetics analysis result.'})</span></p><p><b>subject</b>: <a>J*********** C***********</a></p><p><b>issued</b>: 03/04/2013 3:30:10 PM</p><p><b>value</b>: *4 <span>(Details : {http://pharmakb.org code 'PA16581679' = 'PA16581679', given as '*4'})</span></p><p><b>specimen</b>: <a>Molecular Specimen ID: MLD45-Z4-1234</a></p><blockquote><p><b>related</b></p><p><b>type</b>: derived-from</p><p><b>target</b>: <a>Sequence/example-pgx-1</a></p></blockquote><blockquote><p><b>related</b></p><p><b>type</b>: derived-from</p><p><b>target</b>: <a>Sequence/example-pgx-2</a></p></blockquote></div></text><extension url="http://hl7.org/fhir/StructureDefinition/observation-geneticsGene">
        <valueCodeableConcept>
            <coding>
                <system value="http://www.genenames.org"/>
                <code value="2623"/>
                <display value="CYP2C9"/>
            </coding>
        </valueCodeableConcept>
    </extension>
    <extension url="http://hl7.org/fhir/StructureDefinition/observation-geneticsSequence">
        <valueReference>
            <reference value="Sequence/example-sequence1"/>
        </valueReference>
    </extension>
    <extension url="http://hl7.org/fhir/StructureDefinition/observation-geneticsSequence">
        <valueReference>
            <reference value="Sequence/example-sequence2"/>
        </valueReference>
    </extension>
    <status value="unknown"/>
    <code>
      <coding>
        <system value="http://loinc.org"/>
        <code value="55233-1"/>
        <display value="Genetic analysis master panel-- This is the parent OBR for the panel holding all of the
       associated observations that can be reported with a molecular genetics analysis result."/>
      </coding>
    </code>
    <subject>
        <reference value="Patient/727127"/>
        <display value="J*********** C***********"/>
    </subject>
    <issued value="2013-04-03T15:30:10+01:00"/>
    <valueCodeableConcept>
        <coding>
            <system value="http://pharmakb.org"/>
            <code value="PA16581679"/>
            <display value="*4"/>
        </coding>
    </valueCodeableConcept>
    <specimen>
        <reference value="Specimen/genetics-example1-somatic"/>
        <display value="Molecular Specimen ID: MLD45-Z4-1234"/>
    </specimen>
    <!--   >If you do not like "related", you can delete this block<   -->
    <related>
        <type value="derived-from"/>
        <target>
            <reference value="Sequence/example-pgx-1"/>
        </target>
    </related>
    <related>
        <type value="derived-from"/>
        <target>
            <reference value="Sequence/example-pgx-2"/>
        </target>
    </related>
</Observation>