{"abstract":false,"base":"http://hl7.org/fhir/StructureDefinition/DomainResource","contact":[{"telecom":[{"system":"other","value":"http://hl7.org/fhir"}]},{"telecom":[{"system":"other","value":"http://www.hl7.org/Special/committees/orders/index.cfm"}]}],"date":"2015-12-03T09:57:31+11:00","description":"Base StructureDefinition for Specimen Resource","differential":{"element":[{"definition":"A sample to be used for analysis.","mapping":[{"identity":"rim","map":"Role[classCode=SPEC]"},{"identity":"w5","map":"clinical.diagnostics"}],"max":"*","min":0,"path":"Specimen","short":"Sample for analysis","type":[{"code":"DomainResource"}]},{"definition":"Id for specimen.","isSummary":true,"mapping":[{"identity":"v2","map":"SPM-2"},{"identity":"rim","map":".id"},{"identity":"w5","map":"id"}],"max":"*","min":0,"path":"Specimen.identifier","short":"External Identifier","type":[{"code":"Identifier"}]},{"binding":{"description":"Codes providing the status/availability of a specimen.","strength":"required","valueSetReference":{"reference":"http://hl7.org/fhir/ValueSet/specimen-status"}},"definition":"The availability of the specimen.","isModifier":true,"isSummary":true,"mapping":[{"identity":"v2","map":"SPM-20"},{"identity":"rim","map":"status"},{"identity":"w5","map":"status"}],"max":"1","min":0,"path":"Specimen.status","short":"available | unavailable | unsatisfactory | entered-in-error","type":[{"code":"code"}]},{"binding":{"description":"The type of the specimen.","strength":"example","valueSetReference":{"reference":"http://hl7.org/fhir/ValueSet/v2-0487"}},"comments":"The type can change the way that a specimen is handled, and drives what kind of analyses can properly be performed on the specimen. It is frequently used in diagnostic work flow decision making systems.","definition":"The kind of material that forms the specimen.","isSummary":true,"mapping":[{"identity":"v2","map":"SPM-4 and possibly SPM-5"},{"identity":"rim","map":".code"},{"identity":"w5","map":"class"}],"max":"1","min":0,"path":"Specimen.type","short":"Kind of material that forms the specimen","type":[{"code":"CodeableConcept"}]},{"comments":"The parent specimen could be the source from which the current specimen is derived by some processing step (e.g. an aliquot or isolate or extracted nucleic acids from clinical samples) or one of many specimens that were combined to create a pooled sample.","definition":"Reference to the parent (source) specimen which is used when the specimen was either derived from or a component of another specimen.","mapping":[{"identity":"rim","map":".scoper (if parent) .player.scopesRole[classCode=SPEC].player (if child)"}],"max":"*","min":0,"path":"Specimen.parent","short":"Specimen from which this specimen originated","type":[{"code":"Reference","profile":["http://hl7.org/fhir/StructureDefinition/Specimen"]}]},{"definition":"Where the specimen came from. 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This is not necessarily the same as the specimen identifier, depending on local lab procedures.","isSummary":true,"mapping":[{"identity":"v2","map":"SPM-30 (v2.7+)"},{"identity":"rim","map":".participation[typeCode=SBJ].act[classCode=ACSN, moodCode=EVN].id"},{"identity":"w5","map":"id"}],"max":"1","min":0,"path":"Specimen.accessionIdentifier","short":"Identifier assigned by the lab","type":[{"code":"Identifier"}]},{"definition":"Time when specimen was received for processing or testing.","isSummary":true,"mapping":[{"identity":"v2","map":"SPM-18"},{"identity":"rim","map":".participation[typeCode=SBJ].act[code=SPCREC, moodCode=EVN].effectiveTime"},{"identity":"w5","map":"when.done"}],"max":"1","min":0,"path":"Specimen.receivedTime","short":"The time when specimen was received for processing","type":[{"code":"dateTime"}]},{"definition":"Details concerning the specimen collection.","mapping":[{"identity":"v2","map":"SPM-14"},{"identity":"rim","map":".participation[typeCode=SBJ].act[classCode=SPECCOLLECT, moodCode=EVN]"}],"max":"1","min":0,"path":"Specimen.collection","short":"Collection details","type":[{"code":"BackboneElement"}]},{"definition":"Person who collected the specimen.","isSummary":true,"mapping":[{"identity":"v2","map":"PRT"},{"identity":"rim","map":".participation[typeCode=PFM].role"}],"max":"1","min":0,"path":"Specimen.collection.collector","short":"Who collected the specimen","type":[{"code":"Reference","profile":["http://hl7.org/fhir/StructureDefinition/Practitioner"]}]},{"definition":"To communicate any details or issues encountered during the specimen collection procedure.","mapping":[{"identity":"v2","map":"OBX"},{"identity":"rim","map":".inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"annotation\"].value"}],"max":"*","min":0,"path":"Specimen.collection.comment","short":"Collector comments","type":[{"code":"string"}]},{"definition":"Time when specimen was collected from subject - the physiologically relevant time.","isSummary":true,"mapping":[{"identity":"v2","map":"SPM-17"},{"identity":"rim","map":".effectiveTime"},{"identity":"w5","map":"when.init"}],"max":"1","min":0,"path":"Specimen.collection.collected[x]","short":"Collection time","type":[{"code":"dateTime"},{"code":"Period"}]},{"definition":"The quantity of specimen collected; for instance the volume of a blood sample, or the physical measurement of an anatomic pathology sample.","mapping":[{"identity":"v2","map":"SPM-12"},{"identity":"rim","map":".participation[typeCode=SBJ].role[classCode=SPEC].player.quantity"}],"max":"1","min":0,"path":"Specimen.collection.quantity","short":"The quantity of specimen collected","type":[{"code":"Quantity","profile":["http://hl7.org/fhir/StructureDefinition/SimpleQuantity"]}]},{"binding":{"description":"The technique that is used to perform the procedure","strength":"example","valueSetReference":{"reference":"http://hl7.org/fhir/ValueSet/specimen-collection-method"}},"definition":"A coded value specifying the technique that is used to perform the procedure.","mapping":[{"identity":"v2","map":"SPM-7"},{"identity":"rim","map":".methodCode"}],"max":"1","min":0,"path":"Specimen.collection.method","short":"Technique used to perform collection","type":[{"code":"CodeableConcept"}]},{"binding":{"description":"Codes describing anatomical locations. 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This element is not used for environmental specimens.","mapping":[{"identity":"v2","map":"SPM-8 and SPM-9"},{"identity":"rim","map":".targetSiteCode"}],"max":"1","min":0,"path":"Specimen.collection.bodySite","short":"Anatomical collection site","type":[{"code":"CodeableConcept"}]},{"definition":"Details concerning treatment and processing steps for the specimen.","mapping":[{"identity":"rim","map":".participation[typeCode=SBJ].act[code=SPCTRT, moodCode=EVN]"}],"max":"*","min":0,"path":"Specimen.treatment","short":"Treatment and processing step details","type":[{"code":"BackboneElement"}]},{"definition":"Textual description of procedure.","mapping":[{"identity":"rim","map":".text"}],"max":"1","min":0,"path":"Specimen.treatment.description","short":"Textual description of procedure","type":[{"code":"string"}]},{"binding":{"description":"Type indicating the technique used to process the specimen","strength":"example","valueSetReference":{"reference":"http://hl7.org/fhir/ValueSet/specimen-treatment-procedure"}},"definition":"A coded value specifying the procedure used to process the specimen.","mapping":[{"identity":"rim","map":".code"}],"max":"1","min":0,"path":"Specimen.treatment.procedure","short":"Indicates the treatment or processing step applied to the specimen","type":[{"code":"CodeableConcept"}]},{"definition":"Material used in the processing step.","mapping":[{"identity":"v2","map":"SPM-6"},{"identity":"rim","map":".participation[typeCode=CSM].role[classCode=ADTV].code"}],"max":"*","min":0,"path":"Specimen.treatment.additive","short":"Material used in the processing step","type":[{"code":"Reference","profile":["http://hl7.org/fhir/StructureDefinition/Substance"]}]},{"definition":"The container holding the specimen. The recursive nature of containers; i.e. blood in tube in tray in rack is not addressed here.","mapping":[{"identity":"rim","map":".player.scopingRole[classCode=CONT].scoper"}],"max":"*","min":0,"path":"Specimen.container","short":"Direct container of specimen (tube/slide, etc.)","type":[{"code":"BackboneElement"}]},{"definition":"Id for container. There may be multiple; a manufacturer's bar code, lab assigned identifier, etc. The container ID may differ from the specimen id in some circumstances.","isSummary":true,"mapping":[{"identity":"v2","map":"SAC-3"},{"identity":"rim","map":".id"}],"max":"*","min":0,"path":"Specimen.container.identifier","short":"Id for the container","type":[{"code":"Identifier"}]},{"definition":"Textual description of the container.","mapping":[{"identity":"rim","map":".desc"}],"max":"1","min":0,"path":"Specimen.container.description","short":"Textual description of the container","type":[{"code":"string"}]},{"binding":{"description":"Type of specimen container","strength":"example","valueSetReference":{"reference":"http://hl7.org/fhir/ValueSet/specimen-container-type"}},"definition":"The type of container associated with the specimen (e.g. slide, aliquot, etc.).","mapping":[{"identity":"v2","map":"SPM-27"},{"identity":"rim","map":".code"}],"max":"1","min":0,"path":"Specimen.container.type","short":"Kind of container directly associated with specimen","type":[{"code":"CodeableConcept"}]},{"definition":"The capacity (volume or other measure) the container may contain.","mapping":[{"identity":"v2","map":"one of: SAC 16, SAC17 and SAC 20, or SAC 21 and SAC 20"},{"identity":"rim","map":".quantity"}],"max":"1","min":0,"path":"Specimen.container.capacity","short":"Container volume or size","type":[{"code":"Quantity","profile":["http://hl7.org/fhir/StructureDefinition/SimpleQuantity"]}]},{"definition":"The quantity of specimen in the container; may be volume, dimensions, or other appropriate measurements, depending on the specimen type.","mapping":[{"identity":"v2","map":"SAC-23 (value) SAC-24 (units"},{"identity":"rim","map":".playedRole[classCode=CONT].quantity"}],"max":"1","min":0,"path":"Specimen.container.specimenQuantity","short":"Quantity of specimen within container","type":[{"code":"Quantity","profile":["http://hl7.org/fhir/StructureDefinition/SimpleQuantity"]}]},{"binding":{"description":"Substance added to specimen container","strength":"example","valueSetReference":{"reference":"http://hl7.org/fhir/ValueSet/v2-0371"}},"definition":"Introduced substance to preserve, maintain or enhance the specimen. Examples: Formalin, Citrate, EDTA.","mapping":[{"identity":"v2","map":"SAC-27"},{"identity":"rim","map":".scopesRole[classCode=ADTV].player"}],"max":"1","min":0,"path":"Specimen.container.additive[x]","short":"Additive associated with container","type":[{"code":"CodeableConcept"},{"code":"Reference","profile":["http://hl7.org/fhir/StructureDefinition/Substance"]}]}]},"extension":[{"url":"http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm","valueInteger":1}],"fhirVersion":"1.1.0","id":"Specimen","kind":"resource","mapping":[{"identity":"rim","name":"RIM","uri":"http://hl7.org/v3"},{"identity":"w5","name":"W5 Mapping","uri":"http://hl7.org/fhir/w5"},{"identity":"v2","name":"HL7 v2","uri":"http://hl7.org/v2"}],"meta":{"lastUpdated":"2015-12-03T09:57:31.744+11:00"},"name":"Specimen","publisher":"Health Level Seven International (Orders and Observations)","resourceType":"StructureDefinition","snapshot":{"element":[{"definition":"A sample to be used for analysis.","mapping":[{"identity":"rim","map":"Role[classCode=SPEC]"},{"identity":"w5","map":"clinical.diagnostics"}],"max":"*","min":0,"path":"Specimen","short":"Sample for analysis","type":[{"code":"DomainResource"}]},{"comments":"The only time that a resource does not have an id is when it is being submitted to the server using a create operation. Bundles always have an id, though it is usually a generated UUID.","definition":"The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.","isSummary":true,"max":"1","min":0,"path":"Specimen.id","short":"Logical id of this artifact","type":[{"code":"id"}]},{"definition":"The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content may not always be associated with version changes to the resource.","isSummary":true,"max":"1","min":0,"path":"Specimen.meta","short":"Metadata about the resource","type":[{"code":"Meta"}]},{"comments":"Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element as much as possible.","definition":"A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content.","isModifier":true,"isSummary":true,"max":"1","min":0,"path":"Specimen.implicitRules","short":"A set of rules under which this content was created","type":[{"code":"uri"}]},{"binding":{"description":"A human language.","strength":"required","valueSetUri":"http://tools.ietf.org/html/bcp47"},"comments":"Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).","definition":"The base language in which the resource is written.","max":"1","min":0,"path":"Specimen.language","short":"Language of the resource content","type":[{"code":"code"}]},{"alias":["narrative","html","xhtml","display"],"comments":"Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative.","condition":["dom-1"],"definition":"A human-readable narrative that contains a summary of the resource, and may be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it \"clinically safe\" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.","mapping":[{"identity":"rim","map":"Act.text?"}],"max":"1","min":0,"path":"Specimen.text","short":"Text summary of the resource, for human interpretation","type":[{"code":"Narrative"}]},{"alias":["inline resources","anonymous resources","contained resources"],"comments":"This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again.","definition":"These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.","mapping":[{"identity":"rim","map":"N/A"}],"max":"*","min":0,"path":"Specimen.contained","short":"Contained, inline Resources","type":[{"code":"Resource"}]},{"alias":["extensions","user content"],"comments":"There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.","definition":"May be used to represent additional information that is not part of the basic definition of the resource. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.","mapping":[{"identity":"rim","map":"N/A"}],"max":"*","min":0,"path":"Specimen.extension","short":"Additional Content defined by implementations","type":[{"code":"Extension"}]},{"alias":["extensions","user content"],"comments":"There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.","definition":"May be used to represent additional information that is not part of the basic definition of the resource, and that modifies the understanding of the element that contains it. Usually modifier elements provide negation or qualification. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.","isModifier":true,"mapping":[{"identity":"rim","map":"N/A"}],"max":"*","min":0,"path":"Specimen.modifierExtension","short":"Extensions that cannot be ignored","type":[{"code":"Extension"}]},{"definition":"Id for specimen.","isSummary":true,"mapping":[{"identity":"v2","map":"SPM-2"},{"identity":"rim","map":".id"},{"identity":"w5","map":"id"}],"max":"*","min":0,"path":"Specimen.identifier","short":"External Identifier","type":[{"code":"Identifier"}]},{"binding":{"description":"Codes providing the status/availability of a specimen.","strength":"required","valueSetReference":{"reference":"http://hl7.org/fhir/ValueSet/specimen-status"}},"definition":"The availability of the specimen.","isModifier":true,"isSummary":true,"mapping":[{"identity":"v2","map":"SPM-20"},{"identity":"rim","map":"status"},{"identity":"w5","map":"status"}],"max":"1","min":0,"path":"Specimen.status","short":"available | unavailable | unsatisfactory | entered-in-error","type":[{"code":"code"}]},{"binding":{"description":"The type of the specimen.","strength":"example","valueSetReference":{"reference":"http://hl7.org/fhir/ValueSet/v2-0487"}},"comments":"The type can change the way that a specimen is handled, and drives what kind of analyses can properly be performed on the specimen. It is frequently used in diagnostic work flow decision making systems.","definition":"The kind of material that forms the specimen.","isSummary":true,"mapping":[{"identity":"v2","map":"SPM-4 and possibly SPM-5"},{"identity":"rim","map":".code"},{"identity":"w5","map":"class"}],"max":"1","min":0,"path":"Specimen.type","short":"Kind of material that forms the specimen","type":[{"code":"CodeableConcept"}]},{"comments":"The parent specimen could be the source from which the current specimen is derived by some processing step (e.g. an aliquot or isolate or extracted nucleic acids from clinical samples) or one of many specimens that were combined to create a pooled sample.","definition":"Reference to the parent (source) specimen which is used when the specimen was either derived from or a component of another specimen.","mapping":[{"identity":"rim","map":".scoper (if parent) .player.scopesRole[classCode=SPEC].player (if child)"}],"max":"*","min":0,"path":"Specimen.parent","short":"Specimen from which this specimen originated","type":[{"code":"Reference","profile":["http://hl7.org/fhir/StructureDefinition/Specimen"]}]},{"definition":"Where the specimen came from. This may be from the patient(s) or from the environment or a device.","isSummary":true,"mapping":[{"identity":"rim","map":".scoper or .scoper.playsRole"},{"identity":"w5","map":"who.focus"}],"max":"1","min":1,"path":"Specimen.subject","requirements":"Must know the subject context.","short":"Where the specimen came from. This may be from the patient(s) or from the environment or a device","type":[{"code":"Reference","profile":["http://hl7.org/fhir/StructureDefinition/Patient"]},{"code":"Reference","profile":["http://hl7.org/fhir/StructureDefinition/Group"]},{"code":"Reference","profile":["http://hl7.org/fhir/StructureDefinition/Device"]},{"code":"Reference","profile":["http://hl7.org/fhir/StructureDefinition/Substance"]}]},{"definition":"The identifier assigned by the lab when accessioning specimen(s). This is not necessarily the same as the specimen identifier, depending on local lab procedures.","isSummary":true,"mapping":[{"identity":"v2","map":"SPM-30 (v2.7+)"},{"identity":"rim","map":".participation[typeCode=SBJ].act[classCode=ACSN, moodCode=EVN].id"},{"identity":"w5","map":"id"}],"max":"1","min":0,"path":"Specimen.accessionIdentifier","short":"Identifier assigned by the lab","type":[{"code":"Identifier"}]},{"definition":"Time when specimen was received for processing or testing.","isSummary":true,"mapping":[{"identity":"v2","map":"SPM-18"},{"identity":"rim","map":".participation[typeCode=SBJ].act[code=SPCREC, moodCode=EVN].effectiveTime"},{"identity":"w5","map":"when.done"}],"max":"1","min":0,"path":"Specimen.receivedTime","short":"The time when specimen was received for processing","type":[{"code":"dateTime"}]},{"definition":"Details concerning the specimen collection.","mapping":[{"identity":"v2","map":"SPM-14"},{"identity":"rim","map":".participation[typeCode=SBJ].act[classCode=SPECCOLLECT, moodCode=EVN]"}],"max":"1","min":0,"path":"Specimen.collection","short":"Collection details","type":[{"code":"BackboneElement"}]},{"definition":"unique id for the element within a resource (for internal references).","mapping":[{"identity":"rim","map":"n/a"}],"max":"1","min":0,"path":"Specimen.collection.id","representation":["xmlAttr"],"short":"xml:id (or equivalent in JSON)","type":[{"code":"id"}]},{"alias":["extensions","user content"],"comments":"There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.","definition":"May be used to represent additional information that is not part of the basic definition of the element. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.","mapping":[{"identity":"rim","map":"n/a"}],"max":"*","min":0,"path":"Specimen.collection.extension","short":"Additional Content defined by implementations","type":[{"code":"Extension"}]},{"alias":["extensions","user content","modifiers"],"comments":"There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.","definition":"May be used to represent additional information that is not part of the basic definition of the element, and that modifies the understanding of the element that contains it. Usually modifier elements provide negation or qualification. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.","isModifier":true,"mapping":[{"identity":"rim","map":"N/A"}],"max":"*","min":0,"path":"Specimen.collection.modifierExtension","short":"Extensions that cannot be ignored","type":[{"code":"Extension"}]},{"definition":"Person who collected the specimen.","isSummary":true,"mapping":[{"identity":"v2","map":"PRT"},{"identity":"rim","map":".participation[typeCode=PFM].role"}],"max":"1","min":0,"path":"Specimen.collection.collector","short":"Who collected the specimen","type":[{"code":"Reference","profile":["http://hl7.org/fhir/StructureDefinition/Practitioner"]}]},{"definition":"To communicate any details or issues encountered during the specimen collection procedure.","mapping":[{"identity":"v2","map":"OBX"},{"identity":"rim","map":".inboundRelationship[typeCode=SUBJ].source[classCode=OBS, moodCode=EVN, code=\"annotation\"].value"}],"max":"*","min":0,"path":"Specimen.collection.comment","short":"Collector comments","type":[{"code":"string"}]},{"definition":"Time when specimen was collected from subject - the physiologically relevant time.","isSummary":true,"mapping":[{"identity":"v2","map":"SPM-17"},{"identity":"rim","map":".effectiveTime"},{"identity":"w5","map":"when.init"}],"max":"1","min":0,"path":"Specimen.collection.collected[x]","short":"Collection time","type":[{"code":"dateTime"},{"code":"Period"}]},{"definition":"The quantity of specimen collected; for instance the volume of a blood sample, or the physical measurement of an anatomic pathology sample.","mapping":[{"identity":"v2","map":"SPM-12"},{"identity":"rim","map":".participation[typeCode=SBJ].role[classCode=SPEC].player.quantity"}],"max":"1","min":0,"path":"Specimen.collection.quantity","short":"The quantity of specimen collected","type":[{"code":"Quantity","profile":["http://hl7.org/fhir/StructureDefinition/SimpleQuantity"]}]},{"binding":{"description":"The technique that is used to perform the procedure","strength":"example","valueSetReference":{"reference":"http://hl7.org/fhir/ValueSet/specimen-collection-method"}},"definition":"A coded value specifying the technique that is used to perform the procedure.","mapping":[{"identity":"v2","map":"SPM-7"},{"identity":"rim","map":".methodCode"}],"max":"1","min":0,"path":"Specimen.collection.method","short":"Technique used to perform collection","type":[{"code":"CodeableConcept"}]},{"binding":{"description":"Codes describing anatomical locations. May include laterality.","strength":"example","valueSetReference":{"reference":"http://hl7.org/fhir/ValueSet/body-site"}},"comments":"If the use case requires BodySite to be handled as a separate resource instead of an inline coded element (e.g. to identify and track separately) then use the standard extension [body-site-instance](extension-body-site-instance.html).","definition":"Anatomical location from which the specimen was collected (if subject is a patient). This is the target site. This element is not used for environmental specimens.","mapping":[{"identity":"v2","map":"SPM-8 and SPM-9"},{"identity":"rim","map":".targetSiteCode"}],"max":"1","min":0,"path":"Specimen.collection.bodySite","short":"Anatomical collection site","type":[{"code":"CodeableConcept"}]},{"definition":"Details concerning treatment and processing steps for the specimen.","mapping":[{"identity":"rim","map":".participation[typeCode=SBJ].act[code=SPCTRT, moodCode=EVN]"}],"max":"*","min":0,"path":"Specimen.treatment","short":"Treatment and processing step details","type":[{"code":"BackboneElement"}]},{"definition":"unique id for the element within a resource (for internal references).","mapping":[{"identity":"rim","map":"n/a"}],"max":"1","min":0,"path":"Specimen.treatment.id","representation":["xmlAttr"],"short":"xml:id (or equivalent in JSON)","type":[{"code":"id"}]},{"alias":["extensions","user content"],"comments":"There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.","definition":"May be used to represent additional information that is not part of the basic definition of the element. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.","mapping":[{"identity":"rim","map":"n/a"}],"max":"*","min":0,"path":"Specimen.treatment.extension","short":"Additional Content defined by implementations","type":[{"code":"Extension"}]},{"alias":["extensions","user content","modifiers"],"comments":"There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.","definition":"May be used to represent additional information that is not part of the basic definition of the element, and that modifies the understanding of the element that contains it. Usually modifier elements provide negation or qualification. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.","isModifier":true,"mapping":[{"identity":"rim","map":"N/A"}],"max":"*","min":0,"path":"Specimen.treatment.modifierExtension","short":"Extensions that cannot be ignored","type":[{"code":"Extension"}]},{"definition":"Textual description of procedure.","mapping":[{"identity":"rim","map":".text"}],"max":"1","min":0,"path":"Specimen.treatment.description","short":"Textual description of procedure","type":[{"code":"string"}]},{"binding":{"description":"Type indicating the technique used to process the specimen","strength":"example","valueSetReference":{"reference":"http://hl7.org/fhir/ValueSet/specimen-treatment-procedure"}},"definition":"A coded value specifying the procedure used to process the specimen.","mapping":[{"identity":"rim","map":".code"}],"max":"1","min":0,"path":"Specimen.treatment.procedure","short":"Indicates the treatment or processing step applied to the specimen","type":[{"code":"CodeableConcept"}]},{"definition":"Material used in the processing step.","mapping":[{"identity":"v2","map":"SPM-6"},{"identity":"rim","map":".participation[typeCode=CSM].role[classCode=ADTV].code"}],"max":"*","min":0,"path":"Specimen.treatment.additive","short":"Material used in the processing step","type":[{"code":"Reference","profile":["http://hl7.org/fhir/StructureDefinition/Substance"]}]},{"definition":"The container holding the specimen. The recursive nature of containers; i.e. blood in tube in tray in rack is not addressed here.","mapping":[{"identity":"rim","map":".player.scopingRole[classCode=CONT].scoper"}],"max":"*","min":0,"path":"Specimen.container","short":"Direct container of specimen (tube/slide, etc.)","type":[{"code":"BackboneElement"}]},{"definition":"unique id for the element within a resource (for internal references).","mapping":[{"identity":"rim","map":"n/a"}],"max":"1","min":0,"path":"Specimen.container.id","representation":["xmlAttr"],"short":"xml:id (or equivalent in JSON)","type":[{"code":"id"}]},{"alias":["extensions","user content"],"comments":"There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.","definition":"May be used to represent additional information that is not part of the basic definition of the element. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.","mapping":[{"identity":"rim","map":"n/a"}],"max":"*","min":0,"path":"Specimen.container.extension","short":"Additional Content defined by implementations","type":[{"code":"Extension"}]},{"alias":["extensions","user content","modifiers"],"comments":"There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.","definition":"May be used to represent additional information that is not part of the basic definition of the element, and that modifies the understanding of the element that contains it. Usually modifier elements provide negation or qualification. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.","isModifier":true,"mapping":[{"identity":"rim","map":"N/A"}],"max":"*","min":0,"path":"Specimen.container.modifierExtension","short":"Extensions that cannot be ignored","type":[{"code":"Extension"}]},{"definition":"Id for container. There may be multiple; a manufacturer's bar code, lab assigned identifier, etc. The container ID may differ from the specimen id in some circumstances.","isSummary":true,"mapping":[{"identity":"v2","map":"SAC-3"},{"identity":"rim","map":".id"}],"max":"*","min":0,"path":"Specimen.container.identifier","short":"Id for the container","type":[{"code":"Identifier"}]},{"definition":"Textual description of the container.","mapping":[{"identity":"rim","map":".desc"}],"max":"1","min":0,"path":"Specimen.container.description","short":"Textual description of the container","type":[{"code":"string"}]},{"binding":{"description":"Type of specimen container","strength":"example","valueSetReference":{"reference":"http://hl7.org/fhir/ValueSet/specimen-container-type"}},"definition":"The type of container associated with the specimen (e.g. slide, aliquot, etc.).","mapping":[{"identity":"v2","map":"SPM-27"},{"identity":"rim","map":".code"}],"max":"1","min":0,"path":"Specimen.container.type","short":"Kind of container directly associated with specimen","type":[{"code":"CodeableConcept"}]},{"definition":"The capacity (volume or other measure) the container may contain.","mapping":[{"identity":"v2","map":"one of: SAC 16, SAC17 and SAC 20, or SAC 21 and SAC 20"},{"identity":"rim","map":".quantity"}],"max":"1","min":0,"path":"Specimen.container.capacity","short":"Container volume or size","type":[{"code":"Quantity","profile":["http://hl7.org/fhir/StructureDefinition/SimpleQuantity"]}]},{"definition":"The quantity of specimen in the container; may be volume, dimensions, or other appropriate measurements, depending on the specimen type.","mapping":[{"identity":"v2","map":"SAC-23 (value) SAC-24 (units"},{"identity":"rim","map":".playedRole[classCode=CONT].quantity"}],"max":"1","min":0,"path":"Specimen.container.specimenQuantity","short":"Quantity of specimen within container","type":[{"code":"Quantity","profile":["http://hl7.org/fhir/StructureDefinition/SimpleQuantity"]}]},{"binding":{"description":"Substance added to specimen container","strength":"example","valueSetReference":{"reference":"http://hl7.org/fhir/ValueSet/v2-0371"}},"definition":"Introduced substance to preserve, maintain or enhance the specimen. Examples: Formalin, Citrate, EDTA.","mapping":[{"identity":"v2","map":"SAC-27"},{"identity":"rim","map":".scopesRole[classCode=ADTV].player"}],"max":"1","min":0,"path":"Specimen.container.additive[x]","short":"Additive associated with container","type":[{"code":"CodeableConcept"},{"code":"Reference","profile":["http://hl7.org/fhir/StructureDefinition/Substance"]}]}]},"status":"draft","text":{"div":"
\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n
NameFlagsCard.TypeDescription & Constraints\"doco\"
\".\"\".\" Specimen DomainResourceSample for analysis
\".\"\".\"\".\" identifier Σ0..*IdentifierExternal Identifier
\".\"\".\"\".\" status ?! Σ0..1codeavailable | unavailable | unsatisfactory | entered-in-error
SpecimenStatus (Required)
\".\"\".\"\".\" type Σ0..1CodeableConceptKind of material that forms the specimen
v2 Specimen Type (Example)
\".\"\".\"\".\" parent 0..*Reference(Specimen)Specimen from which this specimen originated
\".\"\".\"\".\" subject Σ1..1Reference(Patient | Group | Device | Substance)Where the specimen came from. This may be from the patient(s) or from the environment or a device
\".\"\".\"\".\" accessionIdentifier Σ0..1IdentifierIdentifier assigned by the lab
\".\"\".\"\".\" receivedTime Σ0..1dateTimeThe time when specimen was received for processing
\".\"\".\"\".\" collection 0..1BackboneElementCollection details
\".\"\".\"\".\"\".\" collector Σ0..1Reference(Practitioner)Who collected the specimen
\".\"\".\"\".\"\".\" comment 0..*stringCollector comments
\".\"\".\"\".\"\".\" collected[x] Σ0..1Collection time
\".\"\".\"\".\"\".\"\".\" collectedDateTimedateTime
\".\"\".\"\".\"\".\"\".\" collectedPeriodPeriod
\".\"\".\"\".\"\".\" quantity 0..1SimpleQuantityThe quantity of specimen collected
\".\"\".\"\".\"\".\" method 0..1CodeableConceptTechnique used to perform collection
SpecimenCollectionMethod (Example)
\".\"\".\"\".\"\".\" bodySite 0..1CodeableConceptAnatomical collection site
SNOMED CT Body Structures (Example)
\".\"\".\"\".\" treatment 0..*BackboneElementTreatment and processing step details
\".\"\".\"\".\"\".\" description 0..1stringTextual description of procedure
\".\"\".\"\".\"\".\" procedure 0..1CodeableConceptIndicates the treatment or processing step applied to the specimen
SpecimenTreatmentProcedure (Example)
\".\"\".\"\".\"\".\" additive 0..*Reference(Substance)Material used in the processing step
\".\"\".\"\".\" container 0..*BackboneElementDirect container of specimen (tube/slide, etc.)
\".\"\".\"\".\"\".\" identifier Σ0..*IdentifierId for the container
\".\"\".\"\".\"\".\" description 0..1stringTextual description of the container
\".\"\".\"\".\"\".\" type 0..1CodeableConceptKind of container directly associated with specimen
SpecimenContainer (Example)
\".\"\".\"\".\"\".\" capacity 0..1SimpleQuantityContainer volume or size
\".\"\".\"\".\"\".\" specimenQuantity 0..1SimpleQuantityQuantity of specimen within container
\".\"\".\"\".\"\".\" additive[x] 0..1Additive associated with container
v2 Additive/Preservative (Example)
\".\"\".\"\".\"\".\"\".\" additiveCodeableConceptCodeableConcept
\".\"\".\"\".\"\".\"\".\" additiveReferenceReference(Substance)

\"doco\" Documentation for this format
","status":"generated"},"url":"http://hl7.org/fhir/StructureDefinition/Specimen"}